RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 POM121Q96HA1 1249 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 USB1Q9BQ65 265 aaKnown RBP15.91■□□□□ 0.14
HMGN1-219ENST00000491183 GSX2Q9BZM3 304 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 PAIP1Q9H074 479 aaKnown RBP15.91■□□□□ 0.14
HMGN1-219ENST00000491183 CHST2Q9Y4C5 530 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 PCDHB14Q9Y5E9 798 aa15.91■□□□□ 0.14
HMGN1-219ENST00000491183 DPRXA6NFQ7 191 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 PGM3O95394 542 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 CNOT4O95628 575 aaKnown RBP15.9■□□□□ 0.14
HMGN1-219ENST00000491183 IGHV3-9P01782 118 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 INHBBP09529 407 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 HOXB9P17482 250 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-219ENST00000491183 HOXB4P17483 251 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-219ENST00000491183 COX5AP20674 150 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 PTH2RP49190 550 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 IDH3AP50213 366 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 SLC16A1P53985 500 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 CAPRIN1Q14444 709 aaKnown RBP15.9■□□□□ 0.14
HMGN1-219ENST00000491183 RPS26P11Q5JNZ5 115 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-219ENST00000491183 C6orf10Q5SRN2 563 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 ADAM5Q6NVV9 412 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 YTHDF3Q7Z739 585 aaKnown RBP15.9■□□□□ 0.14
HMGN1-219ENST00000491183 BIVMQ86UB2 503 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 FUNDC1Q8IVP5 155 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 CIARTQ8N365 385 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-219ENST00000491183 CLIP4Q8N3C7 705 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 ZNF433Q8N7K0 673 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-219ENST00000491183 NEUROG1Q92886 237 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 Q96MF0 132 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 EBF4Q9BQW3 602 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 POTEKPQ9BYX7 375 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 CALML5Q9NZT1 146 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 EMC3Q9P0I2 261 aa15.9■□□□□ 0.14
HMGN1-219ENST00000491183 NOSIPQ9Y314 301 aaKnown RBP15.9■□□□□ 0.14
HMGN1-219ENST00000491183 NUDT7P0C024 238 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 PAX1P15863 534 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 MRPL19P49406 292 aaKnown RBP15.89■□□□□ 0.13
HMGN1-219ENST00000491183 CRISP3P54108 245 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 RGNQ15493 299 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 TTMPQ5BVD1 217 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 FBXW9Q5XUX1 488 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 ZNF440Q8IYI8 595 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 PIGXQ8TBF5 258 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 TMEM171Q8WVE6 324 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 DDIT4LQ96D03 193 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 TMEM19Q96HH6 336 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 ATP6V1G3Q96LB4 118 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 ESRP2Q9H6T0 727 aaKnown RBP15.89■□□□□ 0.13
HMGN1-219ENST00000491183 NGBQ9NPG2 151 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 TCF7L2Q9NQB0 619 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 ZNF701Q9NV72 531 aaPredicted RBP15.89■□□□□ 0.13
HMGN1-219ENST00000491183 ZNF443Q9Y2A4 671 aaPredicted RBP15.89■□□□□ 0.13
HMGN1-219ENST00000491183 RNF115Q9Y4L5 304 aa15.89■□□□□ 0.13
HMGN1-219ENST00000491183 A0A0G2JPF8 293 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 HNRNPCL2B2RXH8 293 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 HNRNPCL3B7ZW38 293 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 CLIC1O00299 241 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 GPR171O14626 319 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 HNRNPCL1O60812 293 aaKnown RBP15.88■□□□□ 0.13
HMGN1-219ENST00000491183 TGDSO95455 350 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 CD3EP07766 207 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 THBS1P07996 1170 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 HNRNPCL4P0DMR1 293 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 PRG2P13727 222 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 MAP2K6P52564 334 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 FOXG1P55316 489 aaPredicted RBP15.88■□□□□ 0.13
HMGN1-219ENST00000491183 SLC35A1P78382 337 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 BSPH1Q075Z2 132 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 STK11Q15831 433 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 LIN52Q52LA3 116 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 TIMM23BQ5SRD1 257 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 Q71RC1 249 aaPredicted RBP15.88■□□□□ 0.13
HMGN1-219ENST00000491183 LRRC8CQ8TDW0 803 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 APH1AQ96BI3 265 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 SLC52A3Q9NQ40 469 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 SLC25A37Q9NYZ2 338 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 SLAMF8Q9P0V8 285 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 CADP27708 2225 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 USF3Q68DE3 2245 aa15.88■□□□□ 0.13
HMGN1-219ENST00000491183 A0A096LPI6 279 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 OR5H1A6NKK0 313 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 H7C1Q1 480 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 CLOCKO15516 846 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 EIF1BO60739 113 aaKnown RBP15.87■□□□□ 0.13
HMGN1-219ENST00000491183 MRPL33O75394 65 aaKnown RBP15.87■□□□□ 0.13
HMGN1-219ENST00000491183 BMP2P12643 396 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 UQCRBP14927 111 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 GGT1P19440 569 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 ADSLP30566 484 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-219ENST00000491183 SLC17A1Q14916 467 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 PPA1Q15181 289 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 RNF220Q5VTB9 566 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 BLOC1S3Q6QNY0 202 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 UBE2J2Q8N2K1 259 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 KBTBD8Q8NFY9 601 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 MAL2Q969L2 176 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 NAA11Q9BSU3 229 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-219ENST00000491183 CCDC28BQ9BUN5 200 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 SPATA9Q9BWV2 254 aa15.87■□□□□ 0.13
HMGN1-219ENST00000491183 RSPO3Q9BXY4 272 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms