RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 M0R233 179 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 STX16O14662 325 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 SEC31AO94979 1220 aaKnown RBP11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 PMS2P2O95744 297 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 IFI6P09912 130 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 ALOX5P09917 674 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 GPC1P35052 558 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 HTR6P50406 440 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 SESN3P58005 492 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 POU6F2P78424 691 aaPredicted RBP11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 ZNF763Q0D2J5 394 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 CBFBQ13951 182 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 C3orf36Q3SXR2 165 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 VAX1Q5SQQ9 334 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 SAXO2Q658L1 398 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 KRT80Q6KB66 452 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 KLC3Q6P597 504 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 ZNF614Q8N883 585 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 FAM110DQ8TAY7 271 aaPredicted RBP11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 BCL2L2Q92843 193 aaPredicted RBP11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 RAB39BQ96DA2 213 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 THUMPD3Q9BV44 507 aaKnown RBP11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 ZNF416Q9BWM5 594 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 TRIM31Q9BZY9 425 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 TMEM45AQ9NWC5 275 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 NUP50Q9UKX7 468 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 CMAHPQ9Y471 501 aa11.71□□□□□ -0.53
EXOSC3-207ENST00000490516 ARPC4-TTLL3A0A0A6YYG9 625 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 CCDC151A5D8V7 595 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 ZNF264O43296 627 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 IGHV2-5P01817 119 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 GSNP06396 782 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 RPS17P08708 135 aaKnown RBP11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 GATA3P23771 443 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 OR2B6P58173 313 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 DAG1Q14118 895 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 MAD2L1BPQ15013 274 aaPredicted RBP11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 ARMCX4Q5H9R4 360 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 KLF17Q5JT82 389 aaPredicted RBP11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 CDC73Q6P1J9 531 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 ZNF483Q8TF39 744 aaPredicted RBP11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 SLC25A43Q8WUT9 341 aaPredicted RBP11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 CDS1Q92903 461 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 CIDECQ96AQ7 238 aaPredicted RBP11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 AURKBQ96GD4 344 aaPredicted RBP11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 MS4A4EQ96PG1 132 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 SYT3Q9BQG1 590 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 BTBD2Q9BX70 525 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 OR11A1Q9GZK7 315 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 MS4A5Q9H3V2 200 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 BEX1Q9HBH7 125 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 PLEK2Q9NYT0 353 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 TENM3Q9P273 2699 aa11.7□□□□□ -0.54
EXOSC3-207ENST00000490516 A0A096LPK6 155 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 LOC100653049A0A140TA62 436 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 SLC22A31A6NKX4 558 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 C3orf80F5H4A9 247 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 CDC14BO60729 498 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 KRT34O76011 436 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 HSPA4LO95757 839 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 IGKV3-15P01624 115 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 KRT6AP02538 564 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 KRT6BP04259 564 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 ATP6V1C1P21283 382 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 GSTM5P46439 218 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 KRT6CP48668 564 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 LCN2P80188 198 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 H3F3AP84243 136 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 ATP6AP1LQ52LC2 224 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 EXOSC6Q5RKV6 272 aaKnown RBP11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 OTUD3Q5T2D3 398 aaPredicted RBP11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 MROH9Q5TGP6 573 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 OLFML2AQ68BL7 652 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 ANKRD26P1Q6NSI1 321 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 C16orf87Q6PH81 154 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 C3orf62Q6ZUJ4 267 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 ZNF771Q7L3S4 317 aaPredicted RBP11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 GSPT2Q8IYD1 628 aaKnown RBP11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 ST8SIA1Q92185 356 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 CHMP6Q96FZ7 201 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 KRTAP17-1Q9BYP8 105 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 NELFAQ9H3P2 528 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 NOX3Q9HBY0 568 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 MYEF2Q9P2K5 600 aaKnown RBP11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 TESQ9UGI8 421 aaKnown RBP11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 DTNAQ9Y4J8 743 aa11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 SOX21Q9Y651 276 aaPredicted RBP11.69□□□□□ -0.54
EXOSC3-207ENST00000490516 COL7A1Q02388 2944 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 A0A1B0GUS0 222 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 HMX2A2RU54 273 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 EIF4E2O60573 245 aaKnown RBP11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 ULK1O75385 1050 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 CYP7B1O75881 506 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 KRT33AO76009 404 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 GPANK1O95872 356 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 NAT2P11245 290 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 UBL4AP11441 157 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 PAX7P23759 505 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 EVX1P49640 407 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms