RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 DNAJA3Q96EY1 480 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 ARL5BQ96KC2 179 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 CCDC115Q96NT0 180 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 TRNT1Q96Q11 434 aaKnown RBP9.93□□□□□ -0.82
DUBR-204ENST00000490441 SORT1Q99523 831 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 ZBTB18Q99592 522 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 REG4Q9BYZ8 158 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 OR11A1Q9GZK7 315 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 C20orf27Q9GZN8 174 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 SLCO5A1Q9H2Y9 848 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 MEAF6Q9HAF1 191 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 BTNL2Q9UIR0 455 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 HAO1Q9UJM8 370 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 MGAT4BQ9UQ53 548 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 TMED7-TICAM2A0A0A6YYA0 188 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 CCDC154A6NI56 674 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 CLDN24A6NM45 220 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 ZNF716A6NP11 495 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 SHISA9B4DS77 424 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 HMGN4O00479 90 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 EIF1BO60739 113 aaKnown RBP9.92□□□□□ -0.82
DUBR-204ENST00000490441 RAMP1O60894 148 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 BCAS1O75363 584 aaPredicted RBP9.92□□□□□ -0.82
DUBR-204ENST00000490441 PGM3O95394 542 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 DHRS4L1P0CG22 281 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 NR2F1P10589 423 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 ACVR1BP36896 505 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 ZNF83P51522 516 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 POLR2HP52434 150 aaKnown RBP9.92□□□□□ -0.82
DUBR-204ENST00000490441 SLC16A1P53985 500 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 SLC35A1P78382 337 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 NRF1Q16656 503 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 HHATQ5VTY9 493 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 OGFOD2Q6N063 350 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 SLC22A25Q6T423 547 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 CASP12Q6UXS9 341 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 LRRC74BQ6ZQY2 392 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 ZNF621Q6ZSS3 439 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 CROCCP2Q86T23 111 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 DTX2Q86UW9 622 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 PRIMA1Q86XR5 153 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 ADGRG3Q86Y34 549 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 ANKFN1Q8N957 763 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 MAPK1IP1LQ8NDC0 245 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 OR52N5Q8NH56 324 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 WDR60Q8WVS4 1066 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 CNOT9Q92600 299 aaKnown RBP9.92□□□□□ -0.82
DUBR-204ENST00000490441 PMM1Q92871 262 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 ZG16BQ96DA0 208 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 OR52E6Q96RD3 313 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 NAA11Q9BSU3 229 aaPredicted RBP9.92□□□□□ -0.82
DUBR-204ENST00000490441 TRAF4Q9BUZ4 470 aaPredicted RBP9.92□□□□□ -0.82
DUBR-204ENST00000490441 GRIP2Q9C0E4 1043 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 PNPOQ9NVS9 261 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 PARPBPQ9NWS1 579 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 TAS2R16Q9NYV7 291 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 NPAP1Q9NZP6 1156 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 TMEM181Q9P2C4 612 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 UPB1Q9UBR1 384 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 TRAPPC4Q9Y296 219 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 SLC9A8Q9Y2E8 581 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 TMED7Q9Y3B3 224 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 RTTNQ86VV8 2226 aa9.92□□□□□ -0.82
DUBR-204ENST00000490441 HEATR1Q9H583 2144 aaKnown RBP9.92□□□□□ -0.82
DUBR-204ENST00000490441 COL6A5A8TX70 2615 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 CFAP73A6NFT4 308 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 AGAP5A6NIR3 686 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 KIAA1324LA8MWY0 1029 aaPredicted RBP9.91□□□□□ -0.82
DUBR-204ENST00000490441 ZNF208O43345 1280 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 KRT75O95678 551 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 IGHV4-39P01824 125 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 PGRP06401 933 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 IL7RP16871 459 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 PTAFRP25105 342 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 MAP2K6P52564 334 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 UFM1P61960 85 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 TGFBR3Q03167 851 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 BST1Q10588 318 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 SYPL1Q16563 259 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 AP1ARQ63HQ0 302 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 OR7E24Q6IFN5 339 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 SPATA19Q7Z5L4 167 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 CCDC103Q8IW40 242 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 PEX5LQ8IYB4 626 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 FBXL14Q8N1E6 418 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 ANKRD42Q8N9B4 389 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 ADAD1Q96M93 576 aaKnown RBP9.91□□□□□ -0.82
DUBR-204ENST00000490441 SLC38A1Q9H2H9 487 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 MTHFD2LQ9H903 347 aaPredicted RBP9.91□□□□□ -0.82
DUBR-204ENST00000490441 CACYBPQ9HB71 228 aaKnown RBP9.91□□□□□ -0.82
DUBR-204ENST00000490441 AIG1Q9NVV5 245 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 MALT1Q9UDY8 824 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 OSGIN1Q9UJX0 560 aa9.91□□□□□ -0.82
DUBR-204ENST00000490441 CHD3Q12873 2000 aaKnown RBP9.9□□□□□ -0.82
DUBR-204ENST00000490441 GOLGA8QA0A0J9YX86 632 aa9.9□□□□□ -0.82
DUBR-204ENST00000490441 TMEM72A0PK05 275 aa9.9□□□□□ -0.82
DUBR-204ENST00000490441 PRAMEF27A3QJZ7 478 aa9.9□□□□□ -0.82
DUBR-204ENST00000490441 GOLGA8OA6NCC3 632 aa9.9□□□□□ -0.82
DUBR-204ENST00000490441 TRPC5OSA6NMA1 111 aa9.9□□□□□ -0.82
DUBR-204ENST00000490441 GOLGA8NF8WBI6 632 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms