RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TRIM49D1C9J1S8 452 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 DCTN6O00399 190 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 PFKFB2O60825 505 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 SCGNO76038 276 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 LGI1O95970 557 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 HSMCR30P0CW71 290 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 ZNF44P15621 663 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 MGMTP16455 207 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 COX7A1P24310 79 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 HTR1EP28566 365 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 CALCRP30988 508 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 RFC4P35249 363 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 MAP3K8P41279 467 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 NUP107P57740 925 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 RPS14P62263 151 aaKnown RBP2.65□□□□□ -1.99
CD46-216ENST00000490278 SPIBQ01892 262 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 CKAP4Q07065 602 aaKnown RBP2.65□□□□□ -1.99
CD46-216ENST00000490278 NSDHLQ15738 373 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 CCDC152Q4G0S7 254 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 GPRC6AQ5T6X5 926 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 C11orf71Q6IPW1 123 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 NLRP9Q7RTR0 991 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 FTMTQ8N4E7 242 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 RNF175Q8N4F7 328 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 DCAF4L2Q8NA75 395 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 LINC01555Q8NAE3 123 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 NEIL3Q8TAT5 605 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 SEC22AQ96IW7 307 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 HIST1H4GQ99525 98 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 RAB34Q9BZG1 259 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 LRRN3Q9H3W5 708 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 SUDS3Q9H7L9 328 aaPredicted RBP2.65□□□□□ -1.99
CD46-216ENST00000490278 VCPKMTQ9H867 229 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 FOLH1BQ9HBA9 442 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 AIG1Q9NVV5 245 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 C6orf203Q9P0P8 240 aaPredicted RBP2.65□□□□□ -1.99
CD46-216ENST00000490278 KIF25Q9UIL4 384 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 PRPF19Q9UMS4 504 aaKnown RBP2.65□□□□□ -1.99
CD46-216ENST00000490278 TIMM10BQ9Y5J6 103 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 SLCO1B1Q9Y6L6 691 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 V9GY05 133 aa2.65□□□□□ -1.99
CD46-216ENST00000490278 PNPLA6Q8IY17 1366 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 A8MUA0 341 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 PANO1I0J062 215 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 HIP1O00291 1037 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 CPLX1O14810 134 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 STAMBPO95630 424 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 AP2A1O95782 977 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 KRT6AP02538 564 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 CCDC130P13994 396 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 ATP6V1B2P21281 511 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 SHMT2P34897 504 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 RPL13AP40429 203 aaKnown RBP2.64□□□□□ -1.99
CD46-216ENST00000490278 PRPHP41219 470 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 EFNB2P52799 333 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 PKNOX1P55347 436 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 SELENOTP62341 195 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 GRB7Q14451 532 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 DPYSL2Q16555 572 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 ZNF630Q2M218 657 aaPredicted RBP2.64□□□□□ -1.99
CD46-216ENST00000490278 VSTM4Q8IW00 320 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 CCDC65Q8IXS2 484 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 NKAPP1Q8N9T2 125 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 C20orf203Q8NBC4 194 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 STEAP2Q8NFT2 490 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 IPMKQ8NFU5 416 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 BRSK1Q8TDC3 778 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 RNF138Q8WVD3 245 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 UCN3Q969E3 161 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 SLC35E1Q96K37 410 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 PLGRKTQ9HBL7 147 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 SMOXQ9NWM0 555 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 ASF1AQ9Y294 204 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 POLDIP2Q9Y2S7 368 aa2.64□□□□□ -1.99
CD46-216ENST00000490278 PTCH1Q13635 1447 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 IGKV1D-8A0A087WSZ0 117 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 IGHV1OR21-1A0A087WYE8 117 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 C15orf38-AP3S2A0A0A6YYH1 394 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 PINLYPA6NC86 204 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 GFYI3L273 518 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 RGS16O15492 202 aaPredicted RBP2.63□□□□□ -1.99
CD46-216ENST00000490278 POLR2DO15514 142 aaKnown RBP2.63□□□□□ -1.99
CD46-216ENST00000490278 UGT1A9O60656 530 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 SNNO75324 88 aaPredicted RBP2.63□□□□□ -1.99
CD46-216ENST00000490278 SPAG6O75602 509 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 NR2C1P13056 603 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 PTMSP20962 102 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 PRDX3P30048 256 aaKnown RBP2.63□□□□□ -1.99
CD46-216ENST00000490278 KIR2DS4P43632 304 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 CASP4P49662 377 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 KLK7P49862 253 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 ZNF133P52736 654 aaPredicted RBP2.63□□□□□ -1.99
CD46-216ENST00000490278 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 ASPHQ12797 758 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 DAZ2Q13117 558 aaKnown RBP2.63□□□□□ -1.99
CD46-216ENST00000490278 EXOC3L2Q2M3D2 409 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 ANKDD1AQ495B1 522 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 C1orf220Q5T0J3 134 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 RNF165Q6ZSG1 346 aa2.63□□□□□ -1.99
CD46-216ENST00000490278 PPP1R42Q7Z4L9 355 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms