RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 GPAT3Q53EU6 434 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 C1QTNF12Q5T7M4 302 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 ZNF544Q6NX49 715 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 CLEC2AQ6UVW9 174 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 CCDC103Q8IW40 242 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 KIRREL3Q8IZU9 778 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 FBXL14Q8N1E6 418 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 MUC15Q8N387 334 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 C17orf78Q8N4C9 275 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 AENQ8WTP8 325 aaKnown RBP13.77□□□□□ -0.21
NUP58-213ENST00000490231 DDIT4LQ96D03 193 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 SLC35A5Q9BS91 424 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 AMBRA1Q9C0C7 1298 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 PARPBPQ9NWS1 579 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 MARCOQ9UEW3 520 aaPredicted RBP13.77□□□□□ -0.21
NUP58-213ENST00000490231 DCTN4Q9UJW0 460 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 SLC9A8Q9Y2E8 581 aa13.77□□□□□ -0.21
NUP58-213ENST00000490231 FREM1Q5H8C1 2179 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 TMED7-TICAM2A0A0A6YYA0 188 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 WDR91A4D1P6 747 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 ELOA3DA6NLF2 546 aaPredicted RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 CLDN24A6NM45 220 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 H7C417 338 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 M0R1B8 84 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 FAAHO00519 579 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 ITGA5P08648 1049 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 LBPP18428 481 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 RPL14P50914 215 aaKnown RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 POLR2HP52434 150 aaKnown RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 SLC35A1P78382 337 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 TXNL4AP83876 142 aaKnown RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 LOXL1Q08397 574 aaPredicted RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 RAB35Q15286 201 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 ELOA3BQ3SY89 546 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 SPANXN4Q5MJ08 99 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 B3GLCTQ6Y288 498 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 C1orf162Q8NEQ5 155 aaPredicted RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 ELOA3Q8NG57 546 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 OR52E4Q8NGH9 312 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 CNOT9Q92600 299 aaKnown RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 PMM1Q92871 262 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 DNAJA3Q96EY1 480 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 CCDC115Q96NT0 180 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 TRNT1Q96Q11 434 aaKnown RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 TNFRSF13CQ96RJ3 184 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 NAA11Q9BSU3 229 aaPredicted RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 INPP5KQ9BT40 448 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 REPIN1Q9BWE0 567 aaKnown RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 C20orf27Q9GZN8 174 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 SSU72Q9NP77 194 aaKnown RBP13.76□□□□□ -0.21
NUP58-213ENST00000490231 BTNL2Q9UIR0 455 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 HAO1Q9UJM8 370 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 OSGIN1Q9UJX0 560 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 TMED7Q9Y3B3 224 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 FLVCR1Q9Y5Y0 555 aa13.76□□□□□ -0.21
NUP58-213ENST00000490231 CHD3Q12873 2000 aaKnown RBP13.75□□□□□ -0.21
NUP58-213ENST00000490231 A0A1W2PR80 420 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 FAM234BA2RU67 622 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 AGAP5A6NIR3 686 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 E9PBE3 544 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 AP3D1O14617 1153 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 GPRIN2O60269 458 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 IMPDH2P12268 514 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 SLC25A16P16260 332 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 CCNA2P20248 432 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 S100A3P33764 101 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 SLC1A3P43003 542 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 FABP6P51161 128 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 FOXG1P55316 489 aaPredicted RBP13.75□□□□□ -0.21
NUP58-213ENST00000490231 TGFBR3Q03167 851 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 GNA13Q14344 377 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 SLC17A1Q14916 467 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 FAM174BQ3ZCQ3 159 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 CHRFAM7AQ494W8 412 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 C6orf52Q5T4I8 152 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 CASP12Q6UXS9 341 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 LRRC74BQ6ZQY2 392 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 HMGN2P46Q86SG4 172 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 TRIML2Q8N7C3 387 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 WDR31Q8NA23 367 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 TRIM44Q96DX7 344 aaPredicted RBP13.75□□□□□ -0.21
NUP58-213ENST00000490231 SLC38A1Q9H2H9 487 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 SLC7A10Q9NS82 523 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 UPB1Q9UBR1 384 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 PRDM4Q9UKN5 801 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 AMDHD2Q9Y303 409 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 COL6A5A8TX70 2615 aa13.75□□□□□ -0.21
NUP58-213ENST00000490231 ATRQ13535 2644 aa13.74□□□□□ -0.21
NUP58-213ENST00000490231 TMEM72A0PK05 275 aa13.74□□□□□ -0.21
NUP58-213ENST00000490231 TM9SF1O15321 606 aa13.74□□□□□ -0.21
NUP58-213ENST00000490231 BMP4P12644 408 aa13.74□□□□□ -0.21
NUP58-213ENST00000490231 RPS4Y1P22090 263 aaKnown RBP13.74□□□□□ -0.21
NUP58-213ENST00000490231 TACR3P29371 465 aa13.74□□□□□ -0.21
NUP58-213ENST00000490231 SLC1A6P48664 564 aa13.74□□□□□ -0.21
NUP58-213ENST00000490231 ANXA11P50995 505 aaKnown RBP13.74□□□□□ -0.21
NUP58-213ENST00000490231 VLDLRP98155 873 aa13.74□□□□□ -0.21
NUP58-213ENST00000490231 SYPL1Q16563 259 aa13.74□□□□□ -0.21
NUP58-213ENST00000490231 TMEM249Q2WGJ8 235 aa13.74□□□□□ -0.21
NUP58-213ENST00000490231 TSPO2Q5TGU0 170 aa13.74□□□□□ -0.21
NUP58-213ENST00000490231 OGFOD2Q6N063 350 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms