RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 RPS6KB2Q9UBS0 482 aa15.48■□□□□ 0.07
MDC1-206ENST00000489540 AIM2O14862 343 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 SMAD9O15198 467 aaKnown RBP15.47■□□□□ 0.07
MDC1-206ENST00000489540 FRS3O43559 492 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 EIF1BO60739 113 aaKnown RBP15.47■□□□□ 0.07
MDC1-206ENST00000489540 GCM2O75603 506 aaPredicted RBP15.47■□□□□ 0.07
MDC1-206ENST00000489540 FESP07332 822 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 AGTR1P30556 359 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 CD79BP40259 229 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 OR2B6P58173 313 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 SLC35A1P78382 337 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 HOXC5Q00444 222 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 DMTNQ08495 405 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 RASGEF1BQ0VAM2 473 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 VEZF1Q14119 521 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 CCDC80Q76M96 950 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 ARPINQ7Z6K5 226 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 STK32CQ86UX6 486 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 TUSC5Q8IXB3 177 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 C3orf49Q96BT1 292 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 HOPXQ9BPY8 73 aaPredicted RBP15.47■□□□□ 0.07
MDC1-206ENST00000489540 BCO1Q9HAY6 547 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 FANCFQ9NPI8 374 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 NOTCH2Q04721 2471 aa15.47■□□□□ 0.07
MDC1-206ENST00000489540 INTS1Q8N201 2190 aaKnown RBP15.46■□□□□ 0.07
MDC1-206ENST00000489540 IGHV3-15A0A0B4J1V0 119 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 A8MVM7 634 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 PRDX6P30041 224 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 CPOXP36551 454 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 KCNJ5P48544 419 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 TLE4Q04727 773 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 SNTB1Q13884 538 aaKnown RBP15.46■□□□□ 0.07
MDC1-206ENST00000489540 PDK3Q15120 406 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 GLIPR1L2Q4G1C9 344 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 PIGWQ7Z7B1 504 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 ATG4DQ86TL0 474 aaPredicted RBP15.46■□□□□ 0.07
MDC1-206ENST00000489540 TREML1Q86YW5 311 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 SMYD1Q8NB12 490 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 OR52E4Q8NGH9 312 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 SLC26A7Q8TE54 656 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 DNAJA4Q8WW22 397 aaPredicted RBP15.46■□□□□ 0.07
MDC1-206ENST00000489540 RASSF5Q8WWW0 418 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 ZNF583Q96ND8 569 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 NAA11Q9BSU3 229 aaPredicted RBP15.46■□□□□ 0.07
MDC1-206ENST00000489540 C12orf10Q9HB07 376 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 TMEM27Q9HBJ8 222 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 MCCC2Q9HCC0 563 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 CRIM1Q9NZV1 1036 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 TESQ9UGI8 421 aaKnown RBP15.46■□□□□ 0.07
MDC1-206ENST00000489540 ARL2BPQ9Y2Y0 163 aa15.46■□□□□ 0.07
MDC1-206ENST00000489540 ZNF724A8MTY0 619 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 LGI1O95970 557 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 EPXP11678 715 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 POU2F1P14859 743 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 RGS8P57771 180 aaPredicted RBP15.45■□□□□ 0.06
MDC1-206ENST00000489540 NCALDP61601 193 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 FAM27E3Q08E93 113 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 DUSP7Q16829 419 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 HACD2Q6Y1H2 254 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 BEND4Q6ZU67 534 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 COMTD1Q86VU5 262 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 RANBP3LQ86VV4 465 aaPredicted RBP15.45■□□□□ 0.06
MDC1-206ENST00000489540 STK35Q8TDR2 534 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 DACH2Q96NX9 599 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 PSD2Q9BQI7 771 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 GPATCH1Q9BRR8 931 aaKnown RBP15.45■□□□□ 0.06
MDC1-206ENST00000489540 SELENONQ9NZV5 590 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 NDRG3Q9UGV2 375 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 MED12LQ86YW9 2145 aa15.45■□□□□ 0.06
MDC1-206ENST00000489540 ZC3H12DA2A288 527 aaKnown RBP15.44■□□□□ 0.06
MDC1-206ENST00000489540 C16orf97H3BN30 126 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 NDUFAB1O14561 156 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 IFNA14P01570 189 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 OPN1SWP03999 348 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 GPIP06744 558 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 PNMTP11086 282 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 IMPDH2P12268 514 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 FPR1P21462 350 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 IDUAP35475 653 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 H3F3AP84243 136 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 FAM91A1Q658Y4 838 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 ULK3Q6PHR2 472 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 C6orf89Q6UWU4 347 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 LINC01560Q8TB33 94 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 PIGXQ8TBF5 258 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 EMC3Q9P0I2 261 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 ING1Q9UK53 422 aaPredicted RBP15.44■□□□□ 0.06
MDC1-206ENST00000489540 HCFC1P51610 2035 aa15.44■□□□□ 0.06
MDC1-206ENST00000489540 IGKV3D-15A0A087WSY6 115 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 A0A1B0GWA3 101 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 LIPT2A6NK58 231 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 ELOA3DA6NLF2 546 aaPredicted RBP15.43■□□□□ 0.06
MDC1-206ENST00000489540 FAM220BPB1ANY3 271 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 GPR171O14626 319 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 RRP9O43818 475 aaKnown RBP15.43■□□□□ 0.06
MDC1-206ENST00000489540 FMO6PO60774 539 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 KLK2P20151 261 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 HTR2AP28223 471 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 UGT2B10P36537 528 aa15.43■□□□□ 0.06
MDC1-206ENST00000489540 BNIP2Q12982 314 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms