RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 LCN1P31025 176 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 CCR4P51679 360 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 CCNG1P51959 295 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 SLC16A1P53985 500 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 RPL15P61313 204 aaKnown RBP9.81□□□□□ -0.84
HDAC6-233ENST00000489352 CCL8P80075 99 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 MGAT5Q09328 741 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 TBX2Q13207 712 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-233ENST00000489352 MAD2L1BPQ15013 274 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-233ENST00000489352 PFKFB4Q16877 469 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 HFEQ30201 348 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 TIGD2Q4W5G0 525 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 TECRLQ5HYJ1 363 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 GKAP1Q5VSY0 366 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-233ENST00000489352 TMEM154Q6P9G4 183 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 CBLN3Q6UW01 205 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 C9orf139Q6ZV77 190 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 GOLGA7Q7Z5G4 137 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 CCDC103Q8IW40 242 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 C1orf52Q8N6N3 182 aaKnown RBP9.81□□□□□ -0.84
HDAC6-233ENST00000489352 OR1K1Q8NGR3 316 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 GPR119Q8TDV5 335 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 AURKBQ96GD4 344 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-233ENST00000489352 CHIAQ9BZP6 476 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 RHOJQ9H4E5 214 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 NMRAL1Q9HBL8 299 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 SLC6A13Q9NSD5 602 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 NSMCE4AQ9NXX6 385 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 GPR160Q9UJ42 338 aa9.81□□□□□ -0.84
HDAC6-233ENST00000489352 A0A096LPE4 126 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 ARPC4-TTLL3A0A0A6YYG9 625 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 A0A1W2PPZ6 126 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 ZNF587BE7ETH6 402 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 SFTPBP07988 381 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 NR4A1P22736 598 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 NTSP30990 170 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 SERPINB4P48594 390 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 RNF144AP50876 292 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-233ENST00000489352 GALNT1Q10472 559 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-233ENST00000489352 CBFBQ13951 182 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 QPRTQ15274 297 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 NKPD1Q17RQ9 610 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 SYT14P1Q58G82 188 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 Q6ZTK2 550 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 RAPH1Q70E73 1250 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 OR2L13Q8N349 312 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 FAM169BQ8N8A8 192 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 SLC25A43Q8WUT9 341 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-233ENST00000489352 DNAJA3Q96EY1 480 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 BOD1Q96IK1 185 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 ZNF317Q96PQ6 595 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-233ENST00000489352 SHCBP1LQ9BZQ2 653 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 QRSL1Q9H0R6 528 aaKnown RBP9.8□□□□□ -0.84
HDAC6-233ENST00000489352 NOX3Q9HBY0 568 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 MMP26Q9NRE1 261 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 DECR2Q9NUI1 292 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 TXNDC16Q9P2K2 825 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 LEF1Q9UJU2 399 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-233ENST00000489352 CHMP2BQ9UQN3 213 aa9.8□□□□□ -0.84
HDAC6-233ENST00000489352 MTO1Q9Y2Z2 717 aaKnown RBP9.8□□□□□ -0.84
HDAC6-233ENST00000489352 SOX21Q9Y651 276 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-233ENST00000489352 SPIN1Q9Y657 262 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-233ENST00000489352 CXorf49A8MYA2 514 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-233ENST00000489352 KCNK2O95069 426 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 HSPA4LO95757 839 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 LGI1O95970 557 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 IGKV3-15P01624 115 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 CELA3BP08861 270 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 IGHV4-38-2P0DP08 117 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 PRPS2P11908 318 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 HOXB1P14653 301 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-233ENST00000489352 CBR1P16152 277 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 TYK2P29597 1187 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 ARR3P36575 388 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 CRYBB2P43320 205 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 MAGEB1P43366 347 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 PRKAG1P54619 331 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 OR2B6P58173 313 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 SELENOVP59797 346 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 RPS23P62266 143 aaKnown RBP9.79□□□□□ -0.84
HDAC6-233ENST00000489352 MERTKQ12866 999 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 DEFB112Q30KQ8 113 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 SLC25A53Q5H9E4 307 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 LRIG3Q6UXM1 1119 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 AAED1Q7RTV5 226 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 SZRD1Q7Z422 152 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 IGDCC3Q8IVU1 814 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 SNX33Q8WV41 574 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 SELENOMQ8WWX9 145 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 DYRK2Q92630 601 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 PHF21AQ96BD5 680 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 ELP4Q96EB1 424 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 MARS2Q96GW9 593 aaKnown RBP9.79□□□□□ -0.84
HDAC6-233ENST00000489352 NAA11Q9BSU3 229 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-233ENST00000489352 NOL11Q9H8H0 719 aaKnown RBP9.79□□□□□ -0.84
HDAC6-233ENST00000489352 NOX4Q9NPH5 578 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 SIRT3Q9NTG7 399 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-233ENST00000489352 TNPO3Q9Y5L0 923 aaKnown RBP9.79□□□□□ -0.84
HDAC6-233ENST00000489352 FLVCR1Q9Y5Y0 555 aa9.79□□□□□ -0.84
HDAC6-233ENST00000489352 DYNC2H1Q8NCM8 4307 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms