RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SLC1A3P43003 542 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 HTR3AP46098 478 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 ITGADQ13349 1161 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 AGKQ53H12 422 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 PAGE3Q5JUK9 113 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 Q5PR19 223 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 BLOC1S3Q6QNY0 202 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 Q6ZT83 130 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 SERPINA11Q86U17 422 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 UBE2J2Q8N2K1 259 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 NEUROG1Q92886 237 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 DDIT4LQ96D03 193 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 SPDL1Q96EA4 605 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 ZHX1-C8orf76Q96EF9 292 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 CCDC28BQ9BUN5 200 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 HDHD5Q9BXW7 423 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 TMEM181Q9P2C4 612 aa12.4□□□□□ -0.42
VTI1A-206ENST00000489142 NOSIPQ9Y314 301 aaKnown RBP12.4□□□□□ -0.42
VTI1A-206ENST00000489142 IGKV3D-15A0A087WSY6 115 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 TMEM247A6NEH6 219 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 HMGB1P1B2RPK0 211 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-206ENST00000489142 CLOCKO15516 846 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 RAD51DO75771 328 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 UQCRBP14927 111 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 H2AFXP16104 143 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-206ENST00000489142 FPR1P21462 350 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 MAGEA8P43361 318 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 LARS2Q15031 903 aaKnown RBP12.39□□□□□ -0.43
VTI1A-206ENST00000489142 P2RY6Q15077 328 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 SEZ6L2Q6UXD5 910 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 C20orf204Q6ZNR8 217 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 P3H2Q8IVL5 708 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 NFKBIDQ8NI38 313 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 PIGXQ8TBF5 258 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 APH1AQ96BI3 265 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 SMR3AQ99954 134 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 OR10A4Q9H209 315 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 IKZF5Q9H5V7 419 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 A4GALTQ9NPC4 353 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 SLC52A3Q9NQ40 469 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 DLL4Q9NR61 685 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 EMC3Q9P0I2 261 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 VAPAQ9P0L0 249 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 DCTN4Q9UJW0 460 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 NF1P21359 2839 aa12.39□□□□□ -0.43
VTI1A-206ENST00000489142 A0A0G2JPF8 293 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 A0A1W2PR80 420 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 HNRNPCL2B2RXH8 293 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 HNRNPCL3B7ZW38 293 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 FAAHO00519 579 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 ZNF208O43345 1280 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 HNRNPCL1O60812 293 aaKnown RBP12.38□□□□□ -0.43
VTI1A-206ENST00000489142 SASH3O75995 380 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 AKR7A3O95154 331 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 HNRNPCL4P0DMR1 293 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 NCF2P19878 526 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-206ENST00000489142 CXCR1P25024 350 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 MRPL19P49406 292 aaKnown RBP12.38□□□□□ -0.43
VTI1A-206ENST00000489142 NR1H2P55055 460 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 FOXG1P55316 489 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-206ENST00000489142 RIPPLY3P57055 190 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 SLC35A1P78382 337 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 CEACAM7Q14002 265 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 OR7A5Q15622 319 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 ZNF311Q5JNZ3 666 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 RNF220Q5VTB9 566 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 C9orf135Q5VTT2 229 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 CASP12Q6UXS9 341 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 COMTD1Q86VU5 262 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 ZNF440Q8IYI8 595 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 LILRB1Q8NHL6 650 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-206ENST00000489142 CKAP2Q8WWK9 683 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 HSD17B8Q92506 261 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 AKAP1Q92667 903 aaKnown RBP eCLIP12.38□□□□□ -0.43
VTI1A-206ENST00000489142 PMM1Q92871 262 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 PIGTQ969N2 578 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 TMEM204Q9BSN7 226 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 RSPO3Q9BXY4 272 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-206ENST00000489142 POTEKPQ9BYX7 375 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 ADAM19Q9H013 955 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 CACYBPQ9HB71 228 aaKnown RBP12.38□□□□□ -0.43
VTI1A-206ENST00000489142 ARGLU1Q9NWB6 273 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-206ENST00000489142 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-206ENST00000489142 TRAPPC4Q9Y296 219 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 ZFHX3Q15911 3703 aa12.38□□□□□ -0.43
VTI1A-206ENST00000489142 C5orf58C9J3I9 102 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 HS3ST1O14792 307 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 CD3EP07766 207 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 THBS1P07996 1170 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 COX5AP20674 150 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 IDUAP35475 653 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 CLK1P49759 484 aaKnown RBP12.37□□□□□ -0.43
VTI1A-206ENST00000489142 SLC16A1P53985 500 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 COPZ1P61923 177 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 H3F3AP84243 136 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 BSPH1Q075Z2 132 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 FADDQ13158 208 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 SQLEQ14534 574 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 PDK3Q15120 406 aa12.37□□□□□ -0.43
VTI1A-206ENST00000489142 PPA1Q15181 289 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms