RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RAMP1O60894 148 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 IMPDH2P12268 514 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 UQCRBP14927 111 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 OR2B6P58173 313 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 LARS2Q15031 903 aaKnown RBP22.15■■□□□ 1.14
HMGN1-217ENST00000489072 SFRP5Q5T4F7 317 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 WFDC8Q8IUA0 241 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 STEAP2Q8NFT2 490 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 SPATA9Q9BWV2 254 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 RSPO3Q9BXY4 272 aaPredicted RBP22.15■■□□□ 1.14
HMGN1-217ENST00000489072 IKZF5Q9H5V7 419 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 BCL2L10Q9HD36 194 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 TMEM181Q9P2C4 612 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 TRAPPC4Q9Y296 219 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 DNPH1O43598 174 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 IRX1P78414 480 aaPredicted RBP22.14■■□□□ 1.13
HMGN1-217ENST00000489072 PDK3Q15120 406 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 BEX5Q5H9J7 111 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 PRAMEF8Q5VWM4 474 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 PRAMEF7Q5VXH5 474 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 GALNT5Q7Z7M9 940 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 CCDC103Q8IW40 242 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 DDIT4LQ96D03 193 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 ZHX1-C8orf76Q96EF9 292 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 HDHD5Q9BXW7 423 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 ZNF385DQ9H6B1 395 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 NPHS2Q9NP85 383 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 DCTN4Q9UJW0 460 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 ZNF232Q9UNY5 417 aa22.14■■□□□ 1.13
HMGN1-217ENST00000489072 CADP27708 2225 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 PGM3O95394 542 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 H3F3AP84243 136 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 P2RY6Q15077 328 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 Q6ZT83 130 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 SERPINA11Q86U17 422 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 TGIF2LYQ8IUE0 185 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 CADM2Q8N3J6 435 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 BBS10Q8TAM1 723 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 UBTD1Q9HAC8 227 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 IFT52Q9Y366 437 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 GMEB1Q9Y692 573 aa22.13■■□□□ 1.13
HMGN1-217ENST00000489072 A0A1W2PP18 115 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 ARAFP10398 606 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 NCF2P19878 526 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-217ENST00000489072 IL32P24001 234 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 NTF4P34130 210 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 SLC16A1P53985 500 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 ITGADQ13349 1161 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 ZSWIM7Q19AV6 140 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 ZNF311Q5JNZ3 666 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 GCNT6Q5T4J0 391 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 WBP2NLQ6ICG8 309 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 NFKBIDQ8NI38 313 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 PIGXQ8TBF5 258 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 KISS1RQ969F8 398 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-217ENST00000489072 TMUB1Q9BVT8 246 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 EMC3Q9P0I2 261 aa22.12■■□□□ 1.13
HMGN1-217ENST00000489072 C2CD3Q4AC94 2353 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 FRS3O43559 492 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 PPIBP23284 216 aaKnown RBP22.11■■□□□ 1.13
HMGN1-217ENST00000489072 MAP2K6P52564 334 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 SLC35A1P78382 337 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 BNIP2Q12982 314 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 TAB1Q15750 504 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 ACKR1Q16570 336 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 ALKBH2Q6NS38 261 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 DLEU7Q6UYE1 221 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 ZNF100Q8IYN0 542 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 PLPPR2Q96GM1 343 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 RABEP2Q9H5N1 569 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 CACYBPQ9HB71 228 aaKnown RBP22.11■■□□□ 1.13
HMGN1-217ENST00000489072 BEX4Q9NWD9 120 aaPredicted RBP22.11■■□□□ 1.13
HMGN1-217ENST00000489072 ZNF446Q9NWS9 450 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 PRDM4Q9UKN5 801 aa22.11■■□□□ 1.13
HMGN1-217ENST00000489072 C5orf58C9J3I9 102 aa22.1■■□□□ 1.13
HMGN1-217ENST00000489072 LYZL6O75951 148 aa22.1■■□□□ 1.13
HMGN1-217ENST00000489072 PLAUP00749 431 aa22.1■■□□□ 1.13
HMGN1-217ENST00000489072 FPR1P21462 350 aa22.1■■□□□ 1.13
HMGN1-217ENST00000489072 CXCR1P25024 350 aa22.1■■□□□ 1.13
HMGN1-217ENST00000489072 COPZ1P61923 177 aa22.1■■□□□ 1.13
HMGN1-217ENST00000489072 ADAM8P78325 824 aa22.1■■□□□ 1.13
HMGN1-217ENST00000489072 HOXC5Q00444 222 aa22.1■■□□□ 1.13
HMGN1-217ENST00000489072 BHLHA15Q7RTS1 189 aaPredicted RBP22.1■■□□□ 1.13
HMGN1-217ENST00000489072 CPPED1Q9BRF8 314 aaPredicted RBP22.1■■□□□ 1.13
HMGN1-217ENST00000489072 POTEKPQ9BYX7 375 aa22.1■■□□□ 1.13
HMGN1-217ENST00000489072 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.1■■□□□ 1.13
HMGN1-217ENST00000489072 NOSIPQ9Y314 301 aaKnown RBP22.1■■□□□ 1.13
HMGN1-217ENST00000489072 IGHV3-9P01782 118 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 ETS2P15036 469 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 GPX2P18283 190 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 COX5AP20674 150 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 IGHV1-2P23083 117 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 CDK6Q00534 326 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 SEZ6L2Q6UXD5 910 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 ZNF704Q6ZNC4 412 aaPredicted RBP22.09■■□□□ 1.13
HMGN1-217ENST00000489072 COMTD1Q86VU5 262 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 C3orf49Q96BT1 292 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 TMEM204Q9BSN7 226 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 ARMC7Q9H6L4 198 aa22.09■■□□□ 1.13
HMGN1-217ENST00000489072 A0A0G2JND7 137 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms