RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 GSX1Q9H4S2 264 aaPredicted RBP16.89■□□□□ 0.29
CLIP2-206ENST00000487091 ESRP2Q9H6T0 727 aaKnown RBP16.89■□□□□ 0.29
CLIP2-206ENST00000487091 NOSIPQ9Y314 301 aaKnown RBP16.89■□□□□ 0.29
CLIP2-206ENST00000487091 USF3Q68DE3 2245 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 A0A0G2JPF8 293 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 TMEM72A0PK05 275 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 TMEM247A6NEH6 219 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 HNRNPCL2B2RXH8 293 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 HNRNPCL3B7ZW38 293 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 EIF1BO60739 113 aaKnown RBP16.88■□□□□ 0.29
CLIP2-206ENST00000487091 HNRNPCL1O60812 293 aaKnown RBP16.88■□□□□ 0.29
CLIP2-206ENST00000487091 LYZL6O75951 148 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 CD3EP07766 207 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 THBS1P07996 1170 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 HNRNPCL4P0DMR1 293 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 IGHV1-2P23083 117 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 SLC35A1P78382 337 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 CAPRIN1Q14444 709 aaKnown RBP16.88■□□□□ 0.29
CLIP2-206ENST00000487091 GTDC1Q4AE62 458 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 C6orf10Q5SRN2 563 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 FBXW9Q5XUX1 488 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 P2RY8Q86VZ1 359 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 TMEM171Q8WVE6 324 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 AKAP1Q92667 903 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLIP2-206ENST00000487091 RAD21L1Q9H4I0 556 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 TCF7L2Q9NQB0 619 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 RLIMQ9NVW2 624 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 ZNF232Q9UNY5 417 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 RNF115Q9Y4L5 304 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 PCDHB14Q9Y5E9 798 aa16.88■□□□□ 0.29
CLIP2-206ENST00000487091 NIPBLQ6KC79 2804 aaeCLIP16.88■□□□□ 0.29
CLIP2-206ENST00000487091 POLR3GO15318 223 aaPredicted RBP16.87■□□□□ 0.29
CLIP2-206ENST00000487091 PGM3O95394 542 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 BCHEP06276 602 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 INHBBP09529 407 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 ACAA2P42765 397 aaKnown RBP16.87■□□□□ 0.29
CLIP2-206ENST00000487091 STX1BP61266 288 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 LARS2Q15031 903 aaKnown RBP16.87■□□□□ 0.29
CLIP2-206ENST00000487091 TIMM23BQ5SRD1 257 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 RNF220Q5VTB9 566 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 SEZ6L2Q6UXD5 910 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 ZNF836Q6ZNA1 936 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 YTHDF3Q7Z739 585 aaKnown RBP16.87■□□□□ 0.29
CLIP2-206ENST00000487091 VRK2Q86Y07 508 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 CCDC103Q8IW40 242 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 APH1AQ96BI3 265 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 DNAJA3Q96EY1 480 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 PERPQ96FX8 193 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 AURKBQ96GD4 344 aaPredicted RBP16.87■□□□□ 0.29
CLIP2-206ENST00000487091 ATP6V1G3Q96LB4 118 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 NAA11Q9BSU3 229 aaPredicted RBP16.87■□□□□ 0.29
CLIP2-206ENST00000487091 CCDC28BQ9BUN5 200 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 PAIP1Q9H074 479 aaKnown RBP16.87■□□□□ 0.29
CLIP2-206ENST00000487091 CXorf56Q9H5V9 222 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 ARMC7Q9H6L4 198 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 SLCO1B3Q9NPD5 702 aa16.87■□□□□ 0.29
CLIP2-206ENST00000487091 ZNF701Q9NV72 531 aaPredicted RBP16.87■□□□□ 0.29
CLIP2-206ENST00000487091 CLIC1O00299 241 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 MRPL33O75394 65 aaKnown RBP16.86■□□□□ 0.29
CLIP2-206ENST00000487091 IMPDH2P12268 514 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 BMP2P12643 396 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 GGT1P19440 569 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 ADSLP30566 484 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-206ENST00000487091 PTH2RP49190 550 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 IDH3AP50213 366 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 FADDQ13158 208 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 PPA1Q15181 289 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 RGNQ15493 299 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 KRTAP21-3Q3LHN1 58 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 PRAMEF8Q5VWM4 474 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 PRAMEF7Q5VXH5 474 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.86■□□□□ 0.29
CLIP2-206ENST00000487091 ZNF433Q8N7K0 673 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-206ENST00000487091 LILRB1Q8NHL6 650 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-206ENST00000487091 MUCL1Q96DR8 90 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 TMEM19Q96HH6 336 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 BDH2Q9BUT1 245 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 SPATA9Q9BWV2 254 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 CACYBPQ9HB71 228 aaKnown RBP16.86■□□□□ 0.29
CLIP2-206ENST00000487091 BCL2L10Q9HD36 194 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 ZNF443Q9Y2A4 671 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-206ENST00000487091 IFT52Q9Y366 437 aa16.86■□□□□ 0.29
CLIP2-206ENST00000487091 A0A096LPI6 279 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 ZC3H12DA2A288 527 aaKnown RBP16.85■□□□□ 0.29
CLIP2-206ENST00000487091 DPRXA6NFQ7 191 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 OR5H1A6NKK0 313 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 RAMP1O60894 148 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 GKN3PP0CG01 181 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 HOXB9P17482 250 aaPredicted RBP16.85■□□□□ 0.29
CLIP2-206ENST00000487091 CXCR1P25024 350 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 NTF4P34130 210 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 COPZ1P61923 177 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 IRX1P78414 480 aaPredicted RBP16.85■□□□□ 0.29
CLIP2-206ENST00000487091 STK11Q15831 433 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 WBP2NLQ6ICG8 309 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 SLC2A7Q6PXP3 512 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 PAQR6Q6TCH4 344 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 FUNDC1Q8IVP5 155 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 UBE2J2Q8N2K1 259 aa16.85■□□□□ 0.29
CLIP2-206ENST00000487091 CLIP4Q8N3C7 705 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms