RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 IGHV1OR15-9A0A0B4J2B8 117 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 CLPSP04118 112 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 WNT1P04628 370 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 IFNA16P05015 189 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 PRKAR1AP10644 381 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 PYCR1P32322 319 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 THBS2P35442 1172 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 BCL2A1Q16548 175 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 TBRG1Q3YBR2 411 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 FAM27D1Q5T7N8 215 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 RPTNQ6XPR3 784 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 TRILQ7L0X0 811 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 LRRC28Q86X40 367 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 GKN2Q86XP6 184 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 METTL27Q8N6F8 245 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 LRRC17Q8N6Y2 441 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 POMGNT2Q8NAT1 580 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 OR51Q1Q8NH59 317 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 ZMYND19Q96E35 227 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 PELOQ9BRX2 385 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 CYSLTR2Q9NS75 346 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 ST6GALNAC2Q9UJ37 374 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 CACNA1IQ9P0X4 2223 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 CHURC1-FNTBB4DL54 471 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 TFP02787 698 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 OR2T7P0C7T2 308 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 NME1P15531 152 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 ACVR1BP36896 505 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 FNTBP49356 437 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 SF3A2Q15428 464 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 SFXN4Q6P4A7 337 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 DPY19L2P2Q6ZN68 376 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 ZNF440Q8IYI8 595 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 MS4A15Q8N5U1 240 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 RFLNBQ8N5W9 214 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 TEX19Q8NA77 164 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 DUSP18Q8NEJ0 188 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 TSTD1Q8NFU3 115 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 OR2T27Q8NH04 317 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 LMX1AQ8TE12 382 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 C3orf49Q96BT1 292 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 CNN2Q99439 309 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 TTYH2Q9BSA4 534 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 OR2B2Q9GZK3 357 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 PRODH2Q9UF12 536 aa16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 TMEM184BQ9Y519 407 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-207ENST00000486828 A0A0B4J293 547 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 LRRN3E7EW58 273 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 LYRM1O43325 122 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 ZNF217O75362 1048 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 OR7A10O76100 309 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 FAM157BP0CG42 384 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 ACTA2P62736 377 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 ACTG2P63267 376 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 IFITM2Q01629 132 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 SERTAD2Q14140 314 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 ACSM3Q53FZ2 586 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 KLHL26Q53HC5 615 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 TCTE1Q5JU00 501 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 PLET1Q6UQ28 207 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 SYS1Q8N2H4 156 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 CAPSLQ8WWF8 208 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 SLC7A6Q92536 515 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 GHSRQ92847 366 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 RNF31Q96EP0 1072 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 TPSD1Q9BZJ3 242 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 LRRN3Q9H3W5 708 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 ENAMQ9NRM1 1142 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 DDX28Q9NUL7 540 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 ZNF337Q9Y3M9 751 aa16.48■□□□□ 0.23
PDLIM7-207ENST00000486828 A0A0G2JK05 382 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 H0YIG0 161 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 OGG1O15527 345 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 RPL4P36578 427 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 HCCSP53701 268 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 OR10A3P58181 314 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 LGALS3BPQ08380 585 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 ZFP69Q49AA0 526 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 TP53I3Q53FA7 332 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 Q8N9G6 341 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 ZSCAN1Q8NBB4 408 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 SNX18Q96RF0 628 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 CCNL2Q96S94 520 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 SLC19A3Q9BZV2 496 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 SLC2A4RGQ9NR83 387 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 SOHLH2Q9NX45 425 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 RASD1Q9Y272 281 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 ADAM18Q9Y3Q7 739 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 IGHV5-51A0A0C4DH38 117 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 A0A0G2JMP0 313 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 A0A0X1KG70 313 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 A0A1W2PR77 199 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 FITM1A5D6W6 292 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 A8MV72 311 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 ARPC3O15145 178 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 IDH3BO43837 385 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 SERPINA3P01011 423 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 GSTT2P0CG29 244 aa16.47■□□□□ 0.23
PDLIM7-207ENST00000486828 GSTT2BP0CG30 244 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms