RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 AQP7O14520 342 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 GNGT2O14610 69 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 KLF4O43474 513 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 E2F6O75461 281 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 CCNB2O95067 398 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 BAG2O95816 211 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 ACTL6AO96019 429 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 PEPDP12955 493 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 ZNF708P17019 499 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 BMP7P18075 431 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 CCNA2P20248 432 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 POU3F2P20265 443 aaPredicted RBP8.62□□□□□ -1.03
MCF2L-227ENST00000486806 FKBP2P26885 142 aaKnown RBP8.62□□□□□ -1.03
MCF2L-227ENST00000486806 OMPP47874 163 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 CLK1P49759 484 aaKnown RBP8.62□□□□□ -1.03
MCF2L-227ENST00000486806 CLDN15P56746 228 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 CLDN18P56856 261 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 CRYZQ08257 329 aaKnown RBP8.62□□□□□ -1.03
MCF2L-227ENST00000486806 C19orf57Q0VDD7 668 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 C1orf140Q5VVS0 124 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 VASNQ6EMK4 673 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 PGBD2Q6P3X8 592 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 TTC33Q6PID6 262 aaPredicted RBP8.62□□□□□ -1.03
MCF2L-227ENST00000486806 TBPL2Q6SJ96 375 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 ZNF730Q6ZMV8 503 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 SLC46A3Q7Z3Q1 461 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 P3H2Q8IVL5 708 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 CHERPQ8IWX8 916 aaKnown RBP8.62□□□□□ -1.03
MCF2L-227ENST00000486806 SVOPLQ8N434 492 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 LSM14AQ8ND56 463 aaKnown RBP8.62□□□□□ -1.03
MCF2L-227ENST00000486806 OR10G2Q8NGC3 310 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 RNF217Q8TC41 542 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 FAR1Q8WVX9 515 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 DDIT4LQ96D03 193 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 SNRNP40Q96DI7 357 aaKnown RBP8.62□□□□□ -1.03
MCF2L-227ENST00000486806 KTI12Q96EK9 354 aaPredicted RBP8.62□□□□□ -1.03
MCF2L-227ENST00000486806 ARL5BQ96KC2 179 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 KLHL15Q96M94 604 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 POTEKPQ9BYX7 375 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 DEFB127Q9H1M4 99 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 COQ10BQ9H8M1 238 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 C20orf141Q9NUB4 165 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 NPIPA1Q9UND3 350 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 MED31Q9Y3C7 131 aa8.62□□□□□ -1.03
MCF2L-227ENST00000486806 MAGED1Q9Y5V3 778 aaPredicted RBP8.62□□□□□ -1.03
MCF2L-227ENST00000486806 HEATR5AQ86XA9 2040 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 NCKAP5O14513 1909 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 HTR3EA5X5Y0 456 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 SAC3D1A6NKF1 404 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 GJE1A6NN92 205 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 OR10H3O60404 316 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 BGLAPP02818 100 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 IMPDH2P12268 514 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 ZNF23P17027 643 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 CBLP22681 906 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 PEX2P28328 305 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 SFTPDP35247 375 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 GCKP35557 465 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 CLDN20P56880 219 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 PPP2R2BQ00005 443 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 HSF1Q00613 529 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 PRKCDQ05655 676 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 SLC34A1Q06495 639 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 FOXD4Q12950 439 aaPredicted RBP8.61□□□□□ -1.03
MCF2L-227ENST00000486806 MYBPHQ13203 477 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 BCL2A1Q16548 175 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 ZNF74Q16587 644 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 FAM69AQ5T7M9 428 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 OGFRL1Q5TC84 451 aaPredicted RBP8.61□□□□□ -1.03
MCF2L-227ENST00000486806 C1QL3Q5VWW1 255 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 FBXW10Q5XX13 1052 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 C1orf94Q6P1W5 598 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 FAHD1Q6P587 224 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 FGD2Q7Z6J4 655 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 ZER1Q7Z7L7 766 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 HIPK1Q86Z02 1210 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 ZDHHC13Q8IUH4 622 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 LINC00471Q8N535 108 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 CISD2Q8N5K1 135 aaKnown RBP8.61□□□□□ -1.03
MCF2L-227ENST00000486806 AQP11Q8NBQ7 271 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 ICA1LQ8NDH6 482 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 OR6S1Q8NH40 331 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 PIGXQ8TBF5 258 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 GIPC3Q8TF64 312 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 LIPHQ8WWY8 451 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 ABTB1Q969K4 478 aaPredicted RBP8.61□□□□□ -1.03
MCF2L-227ENST00000486806 TAAR8Q969N4 342 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 MIB2Q96AX9 1013 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 TIMP4Q99727 224 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 GPA33Q99795 319 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 CIB1Q99828 191 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 DGCR6LQ9BY27 220 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 KLHL4Q9C0H6 718 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 PRDM14Q9GZV8 571 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 PDP1Q9P0J1 537 aaPredicted RBP8.61□□□□□ -1.03
MCF2L-227ENST00000486806 TMCC3Q9ULS5 477 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 TMEM5Q9Y2B1 443 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 HDGFL3Q9Y3E1 203 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 EML6Q6ZMW3 1958 aa8.61□□□□□ -1.03
MCF2L-227ENST00000486806 A0A0J9YW62 118 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms