RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 NOX3Q9HBY0 568 aa8.22□□□□□ -1.09
PTPN7-213ENST00000486116 TCF7L1Q9HCS4 588 aa8.22□□□□□ -1.09
PTPN7-213ENST00000486116 MMP26Q9NRE1 261 aa8.22□□□□□ -1.09
PTPN7-213ENST00000486116 GUCA1BQ9UMX6 200 aa8.22□□□□□ -1.09
PTPN7-213ENST00000486116 SLC9A8Q9Y2E8 581 aa8.22□□□□□ -1.09
PTPN7-213ENST00000486116 RNF114Q9Y508 228 aa8.22□□□□□ -1.09
PTPN7-213ENST00000486116 DOCK11Q5JSL3 2073 aa8.22□□□□□ -1.09
PTPN7-213ENST00000486116 PPIAL4EA0A075B759 164 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 PPIAL4CA0A0B4J2A2 164 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 GNG14A0A1W2PPG7 69 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 ZNF503-AS2A6NEH8 195 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 TRIM49D1C9J1S8 452 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 PPIAL4DF5H284 164 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 PMS2P2O95744 297 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 PPIAL4FP0DN26 164 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 IGHV4-38-2P0DP08 117 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 NAT2P11245 290 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 PRPS2P11908 318 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 CHN1P15882 459 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 DDCP20711 480 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 PAX7P23759 505 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 MAGEA8P43361 318 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 MAGEB1P43366 347 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 ILF2Q12905 390 aaKnown RBP8.21□□□□□ -1.1
PTPN7-213ENST00000486116 VPS26BQ4G0F5 336 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 KLHL26Q53HC5 615 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 OTUD3Q5T2D3 398 aaPredicted RBP8.21□□□□□ -1.1
PTPN7-213ENST00000486116 FIP1L1Q6UN15 594 aaKnown RBP8.21□□□□□ -1.1
PTPN7-213ENST00000486116 C9orf139Q6ZV77 190 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 RETREG3Q86VR2 466 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 LRP11Q86VZ4 500 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 TREML1Q86YW5 311 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 GSPT2Q8IYD1 628 aaKnown RBP8.21□□□□□ -1.1
PTPN7-213ENST00000486116 CENPLQ8N0S6 344 aaPredicted RBP8.21□□□□□ -1.1
PTPN7-213ENST00000486116 MMGT1Q8N4V1 131 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 FAM169BQ8N8A8 192 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 FBXO36Q8NEA4 188 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 RFWD2Q8NHY2 731 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 RAB8BQ92930 207 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 LRRC39Q96DD0 335 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 ZHX1-C8orf76Q96EF9 292 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 ARL5BQ96KC2 179 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 EBPLQ9BY08 206 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 TRIM5Q9C035 493 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 MS4A7Q9GZW8 240 aaPredicted RBP8.21□□□□□ -1.1
PTPN7-213ENST00000486116 KCNF1Q9H3M0 494 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 TMEM45AQ9NWC5 275 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 PARPBPQ9NWS1 579 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 CPSF2Q9P2I0 782 aaKnown RBP8.21□□□□□ -1.1
PTPN7-213ENST00000486116 ASH2LQ9UBL3 628 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 VPS29Q9UBQ0 182 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 LEF1Q9UJU2 399 aaPredicted RBP8.21□□□□□ -1.1
PTPN7-213ENST00000486116 PURGQ9UJV8 347 aaKnown RBP8.21□□□□□ -1.1
PTPN7-213ENST00000486116 PCTPQ9UKL6 214 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 WIPI2Q9Y4P8 454 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 TNPO3Q9Y5L0 923 aaKnown RBP8.21□□□□□ -1.1
PTPN7-213ENST00000486116 AUP1Q9Y679 476 aa8.21□□□□□ -1.1
PTPN7-213ENST00000486116 PCLOQ9Y6V0 5065 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 IGHV3OR16-10A0A075B7F0 116 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 A0A096LPE4 126 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 A0A1W2PPZ6 126 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 PPP6CO00743 305 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 DNPH1O43598 174 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 TRAF3IP2O43734 574 aaPredicted RBP8.2□□□□□ -1.1
PTPN7-213ENST00000486116 SKAP2O75563 359 aaPredicted RBP8.2□□□□□ -1.1
PTPN7-213ENST00000486116 CRYBA1P05813 215 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 CSF1P09603 554 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 IFI6P09912 130 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 NR4A1P22736 598 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 IVDP26440 423 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 NTSP30990 170 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 MTNR1AP48039 350 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 H3F3AP84243 136 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 ZNF154Q13106 437 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 ATP6AP1LQ52LC2 224 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 LETMD1Q6P1Q0 360 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 METTL2BQ6P1Q9 378 aaKnown RBP8.2□□□□□ -1.1
PTPN7-213ENST00000486116 LRIG3Q6UXM1 1119 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 RAPH1Q70E73 1250 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 RPS27LQ71UM5 84 aaKnown RBP8.2□□□□□ -1.1
PTPN7-213ENST00000486116 LINGO2Q7L985 606 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 ZNF551Q7Z340 670 aaPredicted RBP8.2□□□□□ -1.1
PTPN7-213ENST00000486116 GAS2L3Q86XJ1 694 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 TMCO5AQ8N6Q1 288 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 CDRT4Q8N9R6 151 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 GLB1L3Q8NCI6 653 aaPredicted RBP8.2□□□□□ -1.1
PTPN7-213ENST00000486116 BHLHE22Q8NFJ8 381 aaPredicted RBP8.2□□□□□ -1.1
PTPN7-213ENST00000486116 OR5W2Q8NH69 310 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 LINC01006Q8NI28 216 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 MAGEE2Q8TD90 523 aaPredicted RBP8.2□□□□□ -1.1
PTPN7-213ENST00000486116 TMEM45BQ96B21 275 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 AURKBQ96GD4 344 aaPredicted RBP8.2□□□□□ -1.1
PTPN7-213ENST00000486116 APIPQ96GX9 242 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 ZNF385DQ9H6B1 395 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 TNFRSF19Q9NS68 423 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 NECAP2Q9NVZ3 263 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 NMRK1Q9NWW6 199 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 GIN1Q9NXP7 522 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 GRID1Q9ULK0 1009 aa8.2□□□□□ -1.1
PTPN7-213ENST00000486116 SRRM5B3KS81 715 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms