RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 ZNF683Q8IZ20 524 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 FGFRL1Q8N441 504 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 ZNF491Q8N8L2 437 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 RNF139Q8WU17 664 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 FAM172AQ8WUF8 416 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 SMARCD2Q92925 531 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 ELSPBP1Q96BH3 223 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 FOXN4Q96NZ1 517 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 COQ7Q99807 217 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 ABCG8Q9H221 673 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 UBE2ZQ9H832 354 aaPredicted RBP4.69□□□□□ -1.66
RTN4-214ENST00000486085 ZNF446Q9NWS9 450 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.69□□□□□ -1.66
RTN4-214ENST00000486085 RRP15Q9Y3B9 282 aaKnown RBP4.69□□□□□ -1.66
RTN4-214ENST00000486085 BDP1A6H8Y1 2624 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 DOCK4Q8N1I0 1966 aa4.69□□□□□ -1.66
RTN4-214ENST00000486085 DOCK6Q96HP0 2047 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 A0A0U1RRA0 63 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 TMEM89A2RUT3 159 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 USP27XA6NNY8 438 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 FOXI3A8MTJ6 420 aaPredicted RBP4.68□□□□□ -1.66
RTN4-214ENST00000486085 MCF2LO15068 1137 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 CCL16O15467 120 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 MBTPS2O43462 519 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 PRPSAP2O60256 369 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 PALMO75781 387 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 VENTXO95231 258 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 PDGFBP01127 241 aaPredicted RBP4.68□□□□□ -1.66
RTN4-214ENST00000486085 APOEP02649 317 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 SLC4A1P02730 911 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 GNSP15586 552 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 PSMA2P25787 234 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 PTGER3P43115 390 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 NPY2RP49146 381 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 RWDD2BP57060 319 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 PDGFRLQ15198 375 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 HAGHQ16775 308 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 EIPR1Q53HC9 387 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 VWA2Q5GFL6 755 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 ABRAXAS1Q6UWZ7 409 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 CCBE1Q6UXH8 406 aaPredicted RBP4.68□□□□□ -1.66
RTN4-214ENST00000486085 P2RY8Q86VZ1 359 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 CDC20BQ86Y33 519 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 HIPK1Q86Z02 1210 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 MFSD6LQ8IWD5 586 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 UMODL1-AS1Q8N2C9 162 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 DEFB123Q8N688 67 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 UBL4BQ8N7F7 174 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 ATP6V0D2Q8N8Y2 350 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 BEST4Q8NFU0 473 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 ACTRT1Q8TDG2 376 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 MAIP1Q8WWC4 291 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 TMEM37Q8WXS4 190 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 FGF13Q92913 245 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 NTNG2Q96CW9 530 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 RBM18Q96H35 190 aaKnown RBP4.68□□□□□ -1.66
RTN4-214ENST00000486085 ADGRL4Q9HBW9 690 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 NRN1Q9NPD7 142 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 HOMER3Q9NSC5 361 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 DDIT4Q9NX09 232 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 RABL2AQ9UBK7 228 aaPredicted RBP4.68□□□□□ -1.66
RTN4-214ENST00000486085 KCNN3Q9UGI6 736 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 PCSK1NQ9UHG2 260 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 DNPEPQ9ULA0 475 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 GUCA1BQ9UMX6 200 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 SNX12Q9UMY4 172 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 SLC9A8Q9Y2E8 581 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 RPH3AQ9Y2J0 694 aaPredicted RBP4.68□□□□□ -1.66
RTN4-214ENST00000486085 KLHDC2Q9Y2U9 406 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 ATG4BQ9Y4P1 393 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 COL4A2P08572 1712 aa4.68□□□□□ -1.66
RTN4-214ENST00000486085 VCANP13611 3396 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 LOC730098B7Z3J9 87 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 E9PAM4 449 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 GOLGA8SH3BPF8 625 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 BOLA2-SMG1P6H3BVE0 249 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 APOC4-APOC2K7ER74 178 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 CHADO15335 359 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 GPRIN2O60269 458 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 CLDN11O75508 207 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 APOC2P02655 101 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 KDELR1P24390 212 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 UCP1P25874 307 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 ELK3P41970 407 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 CDKN2BP42772 138 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 SULT1E1P49888 294 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 SLC7A2P52569 658 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 PLK1P53350 603 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 CDH4P55283 916 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 SH3BGRP55822 239 aaPredicted RBP4.67□□□□□ -1.66
RTN4-214ENST00000486085 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 XRCC4Q13426 336 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 HTR4Q13639 388 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 DPYSQ14117 519 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 TFDP2Q14188 446 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 CRMP1Q14194 572 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 ABRAXAS2Q15018 415 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 PAFAH1B3Q15102 231 aaKnown RBP4.67□□□□□ -1.66
RTN4-214ENST00000486085 TFDP3Q5H9I0 405 aa4.67□□□□□ -1.66
RTN4-214ENST00000486085 MS4A13Q5J8X5 152 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms