RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ADAM19Q9H013 955 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 CLEC4MQ9H2X3 399 aaPredicted RBP11.15□□□□□ -0.62
PTCD1-205ENST00000485746 RASSF1Q9NS23 344 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 EDARQ9UNE0 448 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 TRAPPC4Q9Y296 219 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 GMEB1Q9Y692 573 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 ELOA3DA6NLF2 546 aaPredicted RBP11.14□□□□□ -0.63
PTCD1-205ENST00000485746 FBP2O00757 339 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 SMAD9O15198 467 aaKnown RBP11.14□□□□□ -0.63
PTCD1-205ENST00000485746 EIF1BO60739 113 aaKnown RBP11.14□□□□□ -0.63
PTCD1-205ENST00000485746 NPPAP01160 153 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 GPIP06744 558 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 FPR1P21462 350 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 BNIP2Q12982 314 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 CEACAM7Q14002 265 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 POU4F3Q15319 338 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 OR7A5Q15622 319 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 ELOA3BQ3SY89 546 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 INTS11Q5TA45 600 aaKnown RBP11.14□□□□□ -0.63
PTCD1-205ENST00000485746 NANOGP8Q6NSW7 305 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 CPLX4Q7Z7G2 160 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 SMYD1Q8NB12 490 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 ELOA3Q8NG57 546 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 OR52E4Q8NGH9 312 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 SLC35B4Q969S0 331 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 LRRC58Q96CX6 371 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 ZNF317Q96PQ6 595 aaPredicted RBP11.14□□□□□ -0.63
PTCD1-205ENST00000485746 PSD2Q9BQI7 771 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 POTEKPQ9BYX7 375 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 NANOGQ9H9S0 305 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 TMEM27Q9HBJ8 222 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 C6orf203Q9P0P8 240 aaPredicted RBP11.14□□□□□ -0.63
PTCD1-205ENST00000485746 ARMCX1Q9P291 453 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 NOSIPQ9Y314 301 aaKnown RBP11.14□□□□□ -0.63
PTCD1-205ENST00000485746 PCNX3Q9H6A9 2034 aa11.14□□□□□ -0.63
PTCD1-205ENST00000485746 ENO4A6NNW6 628 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 ZNF724A8MTY0 619 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 A8MVM7 634 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 M0QX08 132 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 GPR171O14626 319 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 DNPH1O43598 174 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 TPST1O60507 370 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 GOSR1O95249 250 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 AHSA1O95433 338 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 KLK2P20151 261 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 IL32P24001 234 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 GTF2E2P29084 291 aaKnown RBP11.13□□□□□ -0.63
PTCD1-205ENST00000485746 PCYT1AP49585 367 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 RGS8P57771 180 aaPredicted RBP11.13□□□□□ -0.63
PTCD1-205ENST00000485746 ADRM1Q16186 407 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 COQ5Q5HYK3 327 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 TFAP2EQ6VUC0 442 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 SPATA21Q7Z572 469 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 PATL1Q86TB9 770 aaKnown RBP11.13□□□□□ -0.63
PTCD1-205ENST00000485746 RANBP3LQ86VV4 465 aaPredicted RBP11.13□□□□□ -0.63
PTCD1-205ENST00000485746 CXorf67Q86X51 503 aaPredicted RBP11.13□□□□□ -0.63
PTCD1-205ENST00000485746 PTOV1Q86YD1 416 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 CCDC103Q8IW40 242 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 UBE2J2Q8N2K1 259 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 POU5F2Q8N7G0 328 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 ZNF300Q96RE9 604 aaPredicted RBP11.13□□□□□ -0.63
PTCD1-205ENST00000485746 HDHD5Q9BXW7 423 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 TRIM2Q9C040 744 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 KAT8Q9H7Z6 458 aaKnown RBP11.13□□□□□ -0.63
PTCD1-205ENST00000485746 BCO1Q9HAY6 547 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 GPR52Q9Y2T5 361 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 CHST2Q9Y4C5 530 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 TESMINQ9Y4I5 508 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 HCFC1P51610 2035 aa11.13□□□□□ -0.63
PTCD1-205ENST00000485746 CACNA1CQ13936 2221 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 CACNA1DQ01668 2161 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 ZC3H12DA2A288 527 aaKnown RBP11.12□□□□□ -0.63
PTCD1-205ENST00000485746 SLC22A2O15244 555 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 MRPL33O75394 65 aaKnown RBP11.12□□□□□ -0.63
PTCD1-205ENST00000485746 MFN2O95140 757 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 ADAP00813 363 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 OPN1SWP03999 348 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 IMPDH2P12268 514 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 PPP3CBP16298 524 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 PCGF2P35227 344 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 SEC24CP53992 1094 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 PDK3Q15120 406 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 GLIPR1L2Q4G1C9 344 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 RABL3Q5HYI8 236 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 OTUD3Q5T2D3 398 aaPredicted RBP11.12□□□□□ -0.63
PTCD1-205ENST00000485746 C1orf140Q5VVS0 124 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 TMEM225Q6GV28 225 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.12□□□□□ -0.63
PTCD1-205ENST00000485746 CDC20BQ86Y33 519 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 STEAP2Q8NFT2 490 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 OR8J3Q8NGG0 315 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 RP9Q8TA86 221 aaKnown RBP11.12□□□□□ -0.63
PTCD1-205ENST00000485746 STK35Q8TDR2 534 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 DNAJA4Q8WW22 397 aaPredicted RBP11.12□□□□□ -0.63
PTCD1-205ENST00000485746 C3orf49Q96BT1 292 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 SLC25A36Q96CQ1 311 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 PIK3IP1Q96FE7 263 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 ACTR6Q9GZN1 396 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 EVA1AQ9H8M9 152 aa11.12□□□□□ -0.63
PTCD1-205ENST00000485746 ADPRHL2Q9NX46 363 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms