RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 TAF11Q15544 211 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 OR1Q1Q15612 314 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 TOMM34Q15785 309 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-208ENST00000485618 NPTX1Q15818 432 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 FXNQ16595 210 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 NRF1Q16656 503 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 RIPPLY2Q5TAB7 128 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 PPP4R4Q6NUP7 873 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 RINLQ6ZS11 566 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 TMPPEQ6ZT21 453 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 HIST3H2AQ7L7L0 130 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 FGD2Q7Z6J4 655 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 ADGRG3Q86Y34 549 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 CDK20Q8IZL9 346 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 ZNF808Q8N4W9 903 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-208ENST00000485618 RNF148Q8N7C7 305 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 CA5BP1Q8WTZ4 195 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 HIST1H2ACQ93077 130 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 SLC38A4Q969I6 547 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 ASB9Q96DX5 294 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 PYURFQ96I23 114 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 HS6ST2Q96MM7 605 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 TUBA1CQ9BQE3 449 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 TTYH2Q9BSA4 534 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 FNDC11Q9BVV2 318 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 SLC19A3Q9BZV2 496 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 KLHL4Q9C0H6 718 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 PCDHAC1Q9H158 963 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 TMEM185BQ9H7F4 350 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 YY1AP1Q9H869 796 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 GP6Q9HCN6 339 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 KRCC1Q9NPI7 259 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-208ENST00000485618 CTPS2Q9NRF8 586 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 DCAF13Q9NV06 445 aaKnown RBP7.44□□□□□ -1.22
SF3A1-208ENST00000485618 ACTR3BQ9P1U1 418 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 ZNF629Q9UEG4 869 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-208ENST00000485618 OSGIN1Q9UJX0 560 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 EMC9Q9Y3B6 208 aa7.44□□□□□ -1.22
SF3A1-208ENST00000485618 HIVEP3Q5T1R4 2406 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 CREBBPQ92793 2442 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 A0A1B0GWA3 101 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 C17orf51A8MQB3 221 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 SHISA8B8ZZ34 492 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 M0R3H8 397 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 GPR171O14626 319 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 TNFSF11O14788 317 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 CHP2O43745 196 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 BCAS1O75363 584 aaPredicted RBP7.43□□□□□ -1.22
SF3A1-208ENST00000485618 GCM2O75603 506 aaPredicted RBP7.43□□□□□ -1.22
SF3A1-208ENST00000485618 CIB2O75838 187 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 PRKD3O94806 890 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 VAMP5O95183 116 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 RCBTB2O95199 551 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 OR6A2O95222 327 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 PMS2P2O95744 297 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 IL18BPO95998 194 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 GLI4P10075 376 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 CTSSP25774 331 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 RBM34P42696 430 aaKnown RBP7.43□□□□□ -1.22
SF3A1-208ENST00000485618 CLDN20P56880 219 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 OR2B6P58173 313 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 HOXC5Q00444 222 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 CHRNB3Q05901 458 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 PON3Q15166 354 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 FAM98BQ52LJ0 330 aaKnown RBP7.43□□□□□ -1.22
SF3A1-208ENST00000485618 ENTPD8Q5MY95 495 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 C1orf140Q5VVS0 124 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 TTC33Q6PID6 262 aaPredicted RBP7.43□□□□□ -1.22
SF3A1-208ENST00000485618 C6orf89Q6UWU4 347 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 DEF8Q6ZN54 512 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 STK32CQ86UX6 486 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 CHERPQ8IWX8 916 aaKnown RBP7.43□□□□□ -1.22
SF3A1-208ENST00000485618 C10orf53Q8N6V4 93 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 GPR32P1Q8NGA4 272 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 OR6T1Q8NGN1 323 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 OR10D3Q8NH80 312 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 VANGL1Q8TAA9 524 aaPredicted RBP7.43□□□□□ -1.22
SF3A1-208ENST00000485618 PIGXQ8TBF5 258 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 POC1BQ8TC44 478 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 ADAMTS16Q8TE57 1224 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 ZNF347Q96SE7 839 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 TMEM43Q9BTV4 400 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 SFXN3Q9BWM7 321 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 NDEL1Q9GZM8 345 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 PIGMQ9H3S5 423 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 SLC24A3Q9HC58 644 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 EMC3Q9P0I2 261 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 C6orf203Q9P0P8 240 aaPredicted RBP7.43□□□□□ -1.22
SF3A1-208ENST00000485618 KLHL9Q9P2J3 617 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 TNFRSF10DQ9UBN6 386 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 CORINQ9Y5Q5 1042 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 HEATR5AQ86XA9 2040 aa7.43□□□□□ -1.22
SF3A1-208ENST00000485618 TRAV36DV7A0A075B6V5 113 aa7.42□□□□□ -1.22
SF3A1-208ENST00000485618 A0A087WUJ7 227 aa7.42□□□□□ -1.22
SF3A1-208ENST00000485618 A0A0B4J2E0 115 aa7.42□□□□□ -1.22
SF3A1-208ENST00000485618 A0A0J9YW62 118 aa7.42□□□□□ -1.22
SF3A1-208ENST00000485618 A0A1B0GX12 115 aa7.42□□□□□ -1.22
SF3A1-208ENST00000485618 MBD3L4A6NDZ8 208 aaPredicted RBP7.42□□□□□ -1.22
SF3A1-208ENST00000485618 MBD3L3A6NE82 208 aaPredicted RBP7.42□□□□□ -1.22
SF3A1-208ENST00000485618 MBD3L5A6NJ08 208 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms