RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 SOD3P08294 240 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 COX5AP20674 150 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 POLR2HP52434 150 aaKnown RBP11.7□□□□□ -0.54
UBA3-210ENST00000485424 CHRNEQ04844 493 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 PDK3Q15120 406 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 AGAP6Q5VW22 663 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 NXNQ6DKJ4 435 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 CASP12Q6UXS9 341 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 SPATA19Q7Z5L4 167 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 CMIPQ8IY22 773 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 FAM71CQ8NEG0 241 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 OR52N5Q8NH56 324 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 PMM1Q92871 262 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 NEUROG1Q92886 237 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 RADILQ96JH8 1075 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 CCDC115Q96NT0 180 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 SORT1Q99523 831 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 PARD6BQ9BYG5 372 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 SAP130Q9H0E3 1048 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 BARX1Q9HBU1 254 aaPredicted RBP11.7□□□□□ -0.54
UBA3-210ENST00000485424 PNPOQ9NVS9 261 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 TMEM181Q9P2C4 612 aa11.7□□□□□ -0.54
UBA3-210ENST00000485424 ING1Q9UK53 422 aaPredicted RBP11.7□□□□□ -0.54
UBA3-210ENST00000485424 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 TMED7-TICAM2A0A0A6YYA0 188 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 TMEM247A6NEH6 219 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 OR5H1A6NKK0 313 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 HMGN4O00479 90 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 EIF1BO60739 113 aaKnown RBP11.69□□□□□ -0.54
UBA3-210ENST00000485424 SCN2BO60939 215 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 KRT75O95678 551 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 PGRP06401 933 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 DANCRP0C864 163 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 DHRS4L1P0CG22 281 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 KITP10721 976 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 UFM1P61960 85 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 PHC1P78364 1004 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 SLC35A1P78382 337 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 BST1Q10588 318 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 FUT5Q11128 374 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 SYPL1Q16563 259 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 NRF1Q16656 503 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 OR7E24Q6IFN5 339 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 OGFOD2Q6N063 350 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 SLC22A25Q6T423 547 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 SEZ6L2Q6UXD5 910 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 ATG4DQ86TL0 474 aaPredicted RBP11.69□□□□□ -0.54
UBA3-210ENST00000485424 PEX5LQ8IYB4 626 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 ZNF433Q8N7K0 673 aaPredicted RBP11.69□□□□□ -0.54
UBA3-210ENST00000485424 ZNF75CPQ92670 426 aaPredicted RBP11.69□□□□□ -0.54
UBA3-210ENST00000485424 ARL5BQ96KC2 179 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 ADAD1Q96M93 576 aaKnown RBP11.69□□□□□ -0.54
UBA3-210ENST00000485424 TRNT1Q96Q11 434 aaKnown RBP11.69□□□□□ -0.54
UBA3-210ENST00000485424 TRIM2Q9C040 744 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 OR11A1Q9GZK7 315 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 AIG1Q9NVV5 245 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 PARPBPQ9NWS1 579 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 TAS2R16Q9NYV7 291 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 TMED7Q9Y3B3 224 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 NBEAL1Q6ZS30 2694 aa11.69□□□□□ -0.54
UBA3-210ENST00000485424 IGKV3D-15A0A087WSY6 115 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 GOLGA8QA0A0J9YX86 632 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 GOLGA8OA6NCC3 632 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 CLDN24A6NM45 220 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 GOLGA8NF8WBI6 632 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 M0R1B8 84 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 RFXANKO14593 260 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 RAMP1O60894 148 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 DBIP07108 87 aaKnown RBP11.68□□□□□ -0.54
UBA3-210ENST00000485424 CXCR1P25024 350 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 PTAFRP25105 342 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 ACVR1BP36896 505 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 ZNF83P51522 516 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 NUDT6P53370 316 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 ATG16L1Q676U5 607 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 KLHL24Q6TFL4 600 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 LRRC74BQ6ZQY2 392 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 ADGRG3Q86Y34 549 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 CCDC103Q8IW40 242 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 ZNF440Q8IYI8 595 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 FBXL14Q8N1E6 418 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 ANKFN1Q8N957 763 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 GLB1L3Q8NCI6 653 aaPredicted RBP11.68□□□□□ -0.54
UBA3-210ENST00000485424 PNPT1Q8TCS8 783 aaKnown RBP11.68□□□□□ -0.54
UBA3-210ENST00000485424 CNOT9Q92600 299 aaKnown RBP11.68□□□□□ -0.54
UBA3-210ENST00000485424 ZBTB9Q96C00 473 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 ZG16BQ96DA0 208 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 RHNO1Q9BSD3 238 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 REG4Q9BYZ8 158 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 SLCO5A1Q9H2Y9 848 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 ARMC7Q9H6L4 198 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 MTHFD2LQ9H903 347 aaPredicted RBP11.68□□□□□ -0.54
UBA3-210ENST00000485424 CALML5Q9NZT1 146 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 P2RX2Q9UBL9 471 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 HAO1Q9UJM8 370 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 TRAPPC4Q9Y296 219 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 SLC9A8Q9Y2E8 581 aa11.68□□□□□ -0.54
UBA3-210ENST00000485424 A0A1W2PR80 420 aa11.67□□□□□ -0.54
UBA3-210ENST00000485424 TMEM72A0PK05 275 aa11.67□□□□□ -0.54
UBA3-210ENST00000485424 FAM234BA2RU67 622 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms