RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 CNN2Q99439 309 aaKnown RBP3.55□□□□□ -1.84
VPS13A-211ENST00000484581 ELOVL4Q9GZR5 314 aa3.55□□□□□ -1.84
VPS13A-211ENST00000484581 ADNPQ9H2P0 1102 aa3.55□□□□□ -1.84
VPS13A-211ENST00000484581 REEP4Q9H6H4 257 aa3.55□□□□□ -1.84
VPS13A-211ENST00000484581 GEMIN7Q9H840 131 aaKnown RBP3.55□□□□□ -1.84
VPS13A-211ENST00000484581 PANK3Q9H999 370 aa3.55□□□□□ -1.84
VPS13A-211ENST00000484581 ANKRA2Q9H9E1 313 aa3.55□□□□□ -1.84
VPS13A-211ENST00000484581 SCRT2Q9NQ03 307 aa3.55□□□□□ -1.84
VPS13A-211ENST00000484581 TMCO1Q9UM00 188 aa3.55□□□□□ -1.84
VPS13A-211ENST00000484581 RALGAPA1Q6GYQ0 2036 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 ARPC4-TTLL3A0A0A6YYG9 625 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 TRBV11-1A0A0K0K1C0 115 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 A0A1B0GWB2 263 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 TCRBV9S1A1TA0A576 114 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 ZNF705EA8MWA4 302 aaPredicted RBP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 E9PAM4 449 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 BOLA2-SMG1P6H3BVE0 249 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 ZG16O60844 167 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 KBTBD11O94819 623 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 ZNF853P0CG23 659 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 LAMP1P11279 417 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 KITLGP21583 273 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 HMGCLP35914 325 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 RAB9AP51151 201 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 CRIP2P52943 208 aaPredicted RBP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 ACLYP53396 1101 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 ATP12AP54707 1039 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 RIPK4P57078 832 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 ERVPABLB-1P60509 514 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 KCNJ2P63252 427 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 IRX1P78414 480 aaPredicted RBP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 MERTKQ12866 999 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 MAB21L1Q13394 359 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 GRB7Q14451 532 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 CHRNA6Q15825 494 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 HADHQ16836 314 aaKnown RBP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 GLYR1Q49A26 553 aaPredicted RBP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 CEP85LQ5SZL2 805 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 LRRC31Q6UY01 552 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 LRRC74BQ6ZQY2 392 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 EIF3MQ7L2H7 374 aaKnown RBP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 SCD5Q86SK9 330 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 LUZP2Q86TE4 346 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 ERI1Q8IV48 349 aaKnown RBP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 OR52H1Q8NGJ2 320 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 OR6T1Q8NGN1 323 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 FAM110BQ8TC76 370 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 ITLN1Q8WWA0 313 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 CFAP53Q96M91 514 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 ZNF578Q96N58 590 aaPredicted RBP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 MCCC1Q96RQ3 725 aaPredicted RBP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 BCL7BQ9BQE9 202 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 PPA2Q9H2U2 334 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 SUDS3Q9H7L9 328 aaPredicted RBP3.54□□□□□ -1.84
VPS13A-211ENST00000484581 DPM3Q9P2X0 92 aa3.54□□□□□ -1.84
VPS13A-211ENST00000484581 A0A1B0GTQ1 180 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 A0A1B0GUS0 222 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 EFCAB7A8K855 629 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 FAM25EA8MYX2 175 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 SPECC1L-ADORA2AF8WAN1 911 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 KIF2AO00139 706 aaPredicted RBP3.53□□□□□ -1.84
VPS13A-211ENST00000484581 SAP18O00422 153 aaKnown RBP3.53□□□□□ -1.84
VPS13A-211ENST00000484581 LATO43561 262 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 NOL4O94818 638 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 H6PDO95479 791 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 LALBAP00709 142 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 MMP1P03956 469 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 SERPIND1P05546 499 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 DPEP1P16444 411 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 IL12AP29459 219 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 PTGDSP41222 190 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 TNNT2P45379 298 aaPredicted RBP3.53□□□□□ -1.84
VPS13A-211ENST00000484581 RPL29P47914 159 aaKnown RBP3.53□□□□□ -1.84
VPS13A-211ENST00000484581 HMGCS2P54868 508 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 PKNOX1P55347 436 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 LMO4P61968 165 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 RPL32P62910 135 aaKnown RBP3.53□□□□□ -1.84
VPS13A-211ENST00000484581 CHRNB3Q05901 458 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 SCRN3Q0VDG4 424 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 PPIL2Q13356 520 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 TMED1Q13445 227 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 GNMTQ14749 295 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 DGUOKQ16854 277 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 ALKBH6Q3KRA9 238 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 CARD16Q5EG05 197 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 ZC2HC1BQ5TFG8 222 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 ZNF600Q6ZNG1 722 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 PGAP1Q75T13 922 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 HPS6Q86YV9 775 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 NUDCD3Q8IVD9 361 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 KATNAL2Q8IYT4 538 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 WDSUB1Q8N9V3 476 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 OR4F6Q8NGB9 312 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 ZPLD1Q8TCW7 415 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 UFD1Q92890 307 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 MS4A14Q96JA4 679 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 C18orf12Q96KH6 178 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 TBX15Q96SF7 602 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms