RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 MFRPQ9BY79 579 aa18.21■□□□□ 0.51
RPUSD3-216ENST00000484134 SLC6A20Q9NP91 592 aa18.21■□□□□ 0.51
RPUSD3-216ENST00000484134 HAO2Q9NYQ3 351 aa18.21■□□□□ 0.51
RPUSD3-216ENST00000484134 WSB2Q9NYS7 404 aaPredicted RBP18.21■□□□□ 0.51
RPUSD3-216ENST00000484134 USP36Q9P275 1121 aaKnown RBP18.21■□□□□ 0.51
RPUSD3-216ENST00000484134 KLHL9Q9P2J3 617 aa18.21■□□□□ 0.51
RPUSD3-216ENST00000484134 KLF15Q9UIH9 416 aa18.21■□□□□ 0.51
RPUSD3-216ENST00000484134 GPR160Q9UJ42 338 aa18.21■□□□□ 0.51
RPUSD3-216ENST00000484134 DOCK9Q9BZ29 2069 aa18.21■□□□□ 0.51
RPUSD3-216ENST00000484134 USP34Q70CQ2 3546 aa18.21■□□□□ 0.51
RPUSD3-216ENST00000484134 NDUFA2O43678 99 aa18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 PQBP1O60828 265 aaKnown RBP18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 SRMP19623 302 aa18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 TMPRSS11FQ6ZWK6 438 aa18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 C12orf40Q86WS4 652 aa18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 RNF113BQ8IZP6 322 aaKnown RBP18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 OR4C6Q8NH72 309 aa18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 SCARB1Q8WTV0 552 aa18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 INSM2Q96T92 566 aaPredicted RBP18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 SDF2Q99470 211 aa18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 COPS3Q9UNS2 423 aa18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 ZNF780BQ9Y6R6 833 aa18.21■□□□□ 0.5
RPUSD3-216ENST00000484134 TRBV2A0A0J9YWF9 115 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 ANKRD20A5PA0PJZ0 165 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 NAP1L6A6NFF2 107 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 CREBL2O60519 120 aaPredicted RBP18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 ECDO95905 644 aaPredicted RBP18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 CXCL10P02778 98 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 HIST1H2ABP04908 130 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 CISD3P0C7P0 127 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 CALCRP30988 508 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 HIST3H2AQ7L7L0 130 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 RANBP3LQ86VV4 465 aaPredicted RBP18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 HIST1H2ACQ93077 130 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 NXPE3Q969Y0 559 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 TNFRSF13CQ96RJ3 184 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 HRH3Q9Y5N1 445 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 A0A087WV48 116 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 ACOD1A6NK06 481 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 IFITM5A6NNB3 132 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 CHURC1-FNTBB4DL54 471 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 SIGLEC5O15389 551 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 PRNPP04156 253 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 VSIG10L2P0DP72 767 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 GABRA1P14867 456 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 NAA10P41227 235 aaPredicted RBP18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 H2BFSP57053 126 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 PPP2CBP62714 309 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 PPP2CAP67775 309 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 ACTC1P68032 377 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 ACTA1P68133 377 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 NTHL1P78549 312 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 SIGLEC14Q08ET2 396 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 RIPPLY1Q0D2K3 151 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 DUSP8Q13202 625 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 MRPL2Q5T653 305 aaKnown RBP18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 LILRA6Q6PI73 481 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 ZNF433Q8N7K0 673 aaPredicted RBP18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 OR5M1Q8NGP8 315 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 OR10Z1Q8NGY1 313 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 OR1S1Q8NH92 325 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 CXorf40AQ8TE69 158 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 FCAMRQ8WWV6 532 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 TTYH1Q9H313 450 aaPredicted RBP18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 FKRPQ9H9S5 495 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 IFT46Q9NQC8 304 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 EXOSC3Q9NQT5 275 aaKnown RBP18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 PFDN2Q9UHV9 154 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 MAFFQ9ULX9 164 aa18.2■□□□□ 0.5
RPUSD3-216ENST00000484134 DUXAA6NLW8 204 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 PEX12O00623 359 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 SLC35G4P0C7Q5 338 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 P2RX1P51575 399 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 ARHGAP11BQ3KRB8 267 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 B3GNTL1Q67FW5 361 aaPredicted RBP18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 OLFML2AQ68BL7 652 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 UNQ9370/PRO34162Q6UXP9 181 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 OR4N5Q8IXE1 308 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 TTLQ8NG68 377 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 SLC2A12Q8TD20 617 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 SP7Q8TDD2 431 aaPredicted RBP18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 ZNRF4Q8WWF5 429 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 C10orf90Q96M02 699 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 SEMA4CQ9C0C4 833 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 ACSL5Q9ULC5 683 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 RABL2BQ9UNT1 228 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 FOXJ3Q9UPW0 622 aa18.19■□□□□ 0.5
RPUSD3-216ENST00000484134 IDSB3KWA1 339 aa18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 ZNF3P17036 446 aa18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 FHL1Q13642 323 aa18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 NUDT18Q6ZVK8 323 aa18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 ERN2Q76MJ5 926 aaKnown RBP18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 KREMEN2Q8NCW0 462 aa18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 CMTM3Q96MX0 182 aa18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 UTP23Q9BRU9 249 aaKnown RBP18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 ARL6Q9H0F7 186 aa18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 GNG8Q9UK08 70 aa18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 ABT1Q9ULW3 272 aaKnown RBP18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 BAIAP2Q9UQB8 552 aa18.18■□□□□ 0.5
RPUSD3-216ENST00000484134 NOTCH4Q99466 2003 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms