RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 MATN1P21941 496 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 CALCRP30988 508 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 OR2B6P58173 313 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 HGFACQ04756 655 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 FUT5Q11128 374 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 ARHGAP11BQ3KRB8 267 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 FAM153CQ494X1 144 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 ATP6AP1LQ52LC2 224 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 TYW3Q6IPR3 259 aaKnown RBP11.19□□□□□ -0.62
UBR4-213ENST00000483922 EMBQ6PCB8 327 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 CASP12Q6UXS9 341 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 C12orf54Q6X4T0 127 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 LINGO2Q7L985 606 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 C6orf120Q7Z4R8 191 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 R3HCC1LQ7Z5L2 792 aaKnown RBP11.19□□□□□ -0.62
UBR4-213ENST00000483922 MYPOPQ86VE0 399 aaPredicted RBP11.19□□□□□ -0.62
UBR4-213ENST00000483922 C10orf107Q8IVU9 208 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 C1orf162Q8NEQ5 155 aaPredicted RBP11.19□□□□□ -0.62
UBR4-213ENST00000483922 PIGXQ8TBF5 258 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 ZNF385AQ96PM9 386 aaKnown RBP11.19□□□□□ -0.62
UBR4-213ENST00000483922 DOK1Q99704 481 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 TXLNGYQ9BZA5 131 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 TSPYL1Q9H0U9 437 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 CA10Q9NS85 328 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 TRAPPC4Q9Y296 219 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 TMED5Q9Y3A6 229 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 HDGFL3Q9Y3E1 203 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 FKBP7Q9Y680 259 aa11.19□□□□□ -0.62
UBR4-213ENST00000483922 TMEM72A0PK05 275 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 B9A039 149 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 AP3D1O14617 1153 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 PIP5K1BO14986 540 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 DNPH1O43598 174 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 PEX11AO75192 247 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 GLRA3O75311 464 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 CDH2P19022 906 aaPredicted RBP11.18□□□□□ -0.62
UBR4-213ENST00000483922 ARRB2P32121 409 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 RYKP34925 604 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 CRHR1P34998 444 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 MAGEA8P43361 318 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 PRPS1P60891 318 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 RIN1Q13671 783 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 EFNB3Q15768 340 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 CFAP157Q5JU67 520 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 ANKRD16Q6P6B7 361 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 SPATA19Q7Z5L4 167 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 CARM1Q86X55 608 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 CLECL1Q8IZS7 167 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 SFXN5Q8TD22 340 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 SLC25A43Q8WUT9 341 aaPredicted RBP11.18□□□□□ -0.62
UBR4-213ENST00000483922 TMEM234Q8WY98 164 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 C1orf50Q9BV19 199 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 ZNF350Q9GZX5 532 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 NELFAQ9H3P2 528 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 TMEM181Q9P2C4 612 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 CRNNQ9UBG3 495 aaPredicted RBP11.18□□□□□ -0.62
UBR4-213ENST00000483922 UPB1Q9UBR1 384 aa11.18□□□□□ -0.62
UBR4-213ENST00000483922 STX11O75558 287 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 DAOP14920 347 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 MPGP29372 298 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 COMPP49747 757 aaPredicted RBP11.17□□□□□ -0.62
UBR4-213ENST00000483922 CLK1P49759 484 aaKnown RBP11.17□□□□□ -0.62
UBR4-213ENST00000483922 IDH3GP51553 393 aaPredicted RBP11.17□□□□□ -0.62
UBR4-213ENST00000483922 CDH15P55291 814 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 NAA20P61599 178 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 SNRPD2P62316 118 aaKnown RBP11.17□□□□□ -0.62
UBR4-213ENST00000483922 TUBA1BP68363 451 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 TUBA4AP68366 448 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 PCLAFQ15004 111 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 TBRG1Q3YBR2 411 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 SPDYE7PQ495Y7 208 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 XKR7Q5GH72 579 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 C6orf136Q5SQH8 315 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 VHLLQ6RSH7 139 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 TUBA1AQ71U36 451 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 EIF3MQ7L2H7 374 aaKnown RBP11.17□□□□□ -0.62
UBR4-213ENST00000483922 SLC46A3Q7Z3Q1 461 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 GRINAQ7Z429 371 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 TMEM99Q8N816 258 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 LINC01356Q8N9X3 169 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 TWIST2Q8WVJ9 160 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 CNOT9Q92600 299 aaKnown RBP11.17□□□□□ -0.62
UBR4-213ENST00000483922 RAB8BQ92930 207 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 ARL8AQ96BM9 186 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 AURKBQ96GD4 344 aaPredicted RBP11.17□□□□□ -0.62
UBR4-213ENST00000483922 SLC38A2Q96QD8 506 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 SNX18Q96RF0 628 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 SAP130Q9H0E3 1048 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 PSMC3IPQ9P2W1 217 aaPredicted RBP11.17□□□□□ -0.62
UBR4-213ENST00000483922 OSGIN1Q9UJX0 560 aa11.17□□□□□ -0.62
UBR4-213ENST00000483922 TMED7-TICAM2A0A0A6YYA0 188 aa11.16□□□□□ -0.62
UBR4-213ENST00000483922 ZNF503-AS2A6NEH8 195 aa11.16□□□□□ -0.62
UBR4-213ENST00000483922 WNT9BO14905 357 aa11.16□□□□□ -0.62
UBR4-213ENST00000483922 SCN2BO60939 215 aa11.16□□□□□ -0.62
UBR4-213ENST00000483922 LGI1O95970 557 aa11.16□□□□□ -0.62
UBR4-213ENST00000483922 SHBGP04278 402 aa11.16□□□□□ -0.62
UBR4-213ENST00000483922 KRT16P08779 473 aa11.16□□□□□ -0.62
UBR4-213ENST00000483922 CELA3BP08861 270 aa11.16□□□□□ -0.62
UBR4-213ENST00000483922 CECR9P0C854 216 aa11.16□□□□□ -0.62
UBR4-213ENST00000483922 NEFHP12036 1026 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms