RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 AIG1Q9NVV5 245 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 BTNL2Q9UIR0 455 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 OSGIN1Q9UJX0 560 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 TMED7Q9Y3B3 224 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 GPR45Q9Y5Y3 372 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 SLC25A15Q9Y619 301 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 DNHD1Q96M86 4753 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 AGAP5A6NIR3 686 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 ITGA5P08648 1049 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 IDUAP35475 653 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 CLNS1AP54105 237 aaKnown RBP15.85■□□□□ 0.13
ATG4B-221ENST00000483778 C9orf135Q5VTT2 229 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 OGFOD2Q6N063 350 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 B3GLCTQ6Y288 498 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 ZNF621Q6ZSS3 439 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 WDR31Q8NA23 367 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 HTRA1Q92743 480 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 TRNT1Q96Q11 434 aaKnown RBP15.85■□□□□ 0.13
ATG4B-221ENST00000483778 OR52E6Q96RD3 313 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 USB1Q9BQ65 265 aaKnown RBP15.85■□□□□ 0.13
ATG4B-221ENST00000483778 EXOSC3Q9NQT5 275 aaKnown RBP15.85■□□□□ 0.13
ATG4B-221ENST00000483778 RLIMQ9NVW2 624 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 B3GALT5Q9Y2C3 310 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 HDGFL3Q9Y3E1 203 aa15.85■□□□□ 0.13
ATG4B-221ENST00000483778 CCT8L1PA6NM43 557 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 RPS4Y1P22090 263 aaKnown RBP15.84■□□□□ 0.13
ATG4B-221ENST00000483778 EPHA3P29320 983 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 TACR3P29371 465 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 SLC16A1P53985 500 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 IRX1P78414 480 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-221ENST00000483778 PPP2R2BQ00005 443 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 GABRA6Q16445 453 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 DTX2Q86UW9 622 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 ANKRD42Q8N9B4 389 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 APH1AQ96BI3 265 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 PANX1Q96RD7 426 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 MTHFD2LQ9H903 347 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-221ENST00000483778 TMEM181Q9P2C4 612 aa15.84■□□□□ 0.13
ATG4B-221ENST00000483778 CIB4A0PJX0 185 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 PDLIM1O00151 329 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 CRLF1O75462 422 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 PGRP06401 933 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 GKN3PP0CG01 181 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 MVDP53602 400 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 CDH11P55287 796 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 SLC25A3Q00325 362 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 DPY19L1Q2PZI1 675 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 MRPL2Q5T653 305 aaKnown RBP15.83■□□□□ 0.12
ATG4B-221ENST00000483778 LRRC74BQ6ZQY2 392 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 P2RY8Q86VZ1 359 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 VRK2Q86Y07 508 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 PIAS4Q8N2W9 510 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-221ENST00000483778 ZIC4Q8N9L1 334 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 OIT3Q8WWZ8 545 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 MUS81Q96NY9 551 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 ADAM19Q9H013 955 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 SLC7A10Q9NS82 523 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 ASB6Q9NWX5 421 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 EMC3Q9P0I2 261 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 TRAPPC4Q9Y296 219 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 FLVCR1Q9Y5Y0 555 aa15.83■□□□□ 0.12
ATG4B-221ENST00000483778 GPRIN2O60269 458 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 MRPL33O75394 65 aaKnown RBP15.82■□□□□ 0.12
ATG4B-221ENST00000483778 NR2F1P10589 423 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 KITP10721 976 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 CD40P25942 277 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 ACAA2P42765 397 aaKnown RBP15.82■□□□□ 0.12
ATG4B-221ENST00000483778 CLK1P49759 484 aaKnown RBP15.82■□□□□ 0.12
ATG4B-221ENST00000483778 POLR2HP52434 150 aaKnown RBP15.82■□□□□ 0.12
ATG4B-221ENST00000483778 EPS8Q12929 822 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 BNIP2Q12982 314 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 SLC17A1Q14916 467 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 TSPO2Q5TGU0 170 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 C11orf71Q6IPW1 123 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 SPATA19Q7Z5L4 167 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 LRRC34Q8IZ02 419 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 TMEM99Q8N816 258 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 PIGXQ8TBF5 258 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 ZHX1-C8orf76Q96EF9 292 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 RAB21Q9UL25 225 aa15.82■□□□□ 0.12
ATG4B-221ENST00000483778 SPIN1Q9Y657 262 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-221ENST00000483778 MXRA5Q9NR99 2828 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 M0R1B8 84 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 GPR171O14626 319 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 SSX4O60224 188 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 SNNO75324 88 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-221ENST00000483778 PRG2P13727 222 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 ETFAP13804 333 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 SLC1A3P43003 542 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 MAGEA8P43361 318 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 LGALS3BPQ08380 585 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 GTDC1Q4AE62 458 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 HHATQ5VTY9 493 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 MALRD1Q5VYJ5 2156 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 CASP12Q6UXS9 341 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 MAVSQ7Z434 540 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 CLIP4Q8N3C7 705 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 MGARPQ8TDB4 240 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 WDR60Q8WVS4 1066 aa15.81■□□□□ 0.12
ATG4B-221ENST00000483778 RSPO3Q9BXY4 272 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms