RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 CAPRIN1Q14444 709 aaKnown RBP17.54■□□□□ 0.4
HPS4-213ENST00000483631 PPA1Q15181 289 aa17.54■□□□□ 0.4
HPS4-213ENST00000483631 ETFDHQ16134 617 aa17.54■□□□□ 0.4
HPS4-213ENST00000483631 COX20Q5RI15 118 aa17.54■□□□□ 0.4
HPS4-213ENST00000483631 MRPL2Q5T653 305 aaKnown RBP17.54■□□□□ 0.4
HPS4-213ENST00000483631 NXNQ6DKJ4 435 aa17.54■□□□□ 0.4
HPS4-213ENST00000483631 ZNF433Q8N7K0 673 aaPredicted RBP17.54■□□□□ 0.4
HPS4-213ENST00000483631 LILRB1Q8NHL6 650 aaPredicted RBP17.54■□□□□ 0.4
HPS4-213ENST00000483631 APH1AQ96BI3 265 aa17.54■□□□□ 0.4
HPS4-213ENST00000483631 SMR3AQ99954 134 aa17.54■□□□□ 0.4
HPS4-213ENST00000483631 GRIP2Q9C0E4 1043 aa17.54■□□□□ 0.4
HPS4-213ENST00000483631 MALT1Q9UDY8 824 aa17.54■□□□□ 0.4
HPS4-213ENST00000483631 OSGIN1Q9UJX0 560 aa17.54■□□□□ 0.4
HPS4-213ENST00000483631 TMED7Q9Y3B3 224 aa17.54■□□□□ 0.4
HPS4-213ENST00000483631 FN1P02751 2386 aaKnown RBP17.54■□□□□ 0.4
HPS4-213ENST00000483631 OR5H1A6NKK0 313 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 OVOL3O00110 214 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 EDNRAP25101 427 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 MRPL19P49406 292 aaKnown RBP17.53■□□□□ 0.4
HPS4-213ENST00000483631 CRISP3P54108 245 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 BSPH1Q075Z2 132 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 ZNF672Q499Z4 452 aaPredicted RBP17.53■□□□□ 0.4
HPS4-213ENST00000483631 SLC9B1Q4ZJI4 515 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 LIN52Q52LA3 116 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 BEND6Q5SZJ8 279 aaPredicted RBP17.53■□□□□ 0.4
HPS4-213ENST00000483631 ZNF775Q96BV0 537 aaPredicted RBP17.53■□□□□ 0.4
HPS4-213ENST00000483631 ITCHQ96J02 903 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 RADILQ96JH8 1075 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 NAA11Q9BSU3 229 aaPredicted RBP17.53■□□□□ 0.4
HPS4-213ENST00000483631 OR11A1Q9GZK7 315 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 ADAM19Q9H013 955 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 PIF1Q9H611 641 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 TPT1P8Q9HAU6 139 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 PARPBPQ9NWS1 579 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 LAMP3Q9UQV4 416 aa17.53■□□□□ 0.4
HPS4-213ENST00000483631 CDHR4A6H8M9 788 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 DPRXA6NFQ7 191 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 AP3D1O14617 1153 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 UBDO15205 165 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 CLOCKO15516 846 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 MRPL33O75394 65 aaKnown RBP17.52■□□□□ 0.4
HPS4-213ENST00000483631 TACR3P29371 465 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 ATP5J2P56134 94 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 OR2B6P58173 313 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 MAPK11Q15759 364 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 RNF220Q5VTB9 566 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 ALKBH2Q6NS38 261 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 PAQR6Q6TCH4 344 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 HMGN2P46Q86SG4 172 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 PNPT1Q8TCS8 783 aaKnown RBP17.52■□□□□ 0.4
HPS4-213ENST00000483631 SMAP2Q8WU79 429 aaPredicted RBP17.52■□□□□ 0.4
HPS4-213ENST00000483631 TRMT61AQ96FX7 289 aaKnown RBP17.52■□□□□ 0.4
HPS4-213ENST00000483631 TRIM2Q9C040 744 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 ASB6Q9NWX5 421 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 TAS2R16Q9NYV7 291 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 SLC9A8Q9Y2E8 581 aa17.52■□□□□ 0.4
HPS4-213ENST00000483631 TMEM72A0PK05 275 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 TMEM247A6NEH6 219 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 ANP32DO95626 131 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 THBS1P07996 1170 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 TFPTP0C1Z6 253 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 POLR2JP52435 117 aaKnown RBP17.51■□□□□ 0.39
HPS4-213ENST00000483631 DSTNP60981 165 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 STK11Q15831 433 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 PRAMEF8Q5VWM4 474 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 PRAMEF7Q5VXH5 474 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 OR7E24Q6IFN5 339 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 MAVSQ7Z434 540 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 MIER2Q8N344 545 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 CIARTQ8N365 385 aaPredicted RBP17.51■□□□□ 0.39
HPS4-213ENST00000483631 OR52P1PQ8NH57 321 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 SLC35B4Q969S0 331 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 ARMC7Q9H6L4 198 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 SLC6A13Q9NSD5 602 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 MGAT4BQ9UQ53 548 aa17.51■□□□□ 0.39
HPS4-213ENST00000483631 HEATR1Q9H583 2144 aaKnown RBP17.51■□□□□ 0.39
HPS4-213ENST00000483631 A0A0G2JPF8 293 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 TRIM64A6NGJ6 449 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 TRIM64BA6NI03 449 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 HNRNPCL2B2RXH8 293 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 HNRNPCL3B7ZW38 293 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 HNRNPCL1O60812 293 aaKnown RBP17.5■□□□□ 0.39
HPS4-213ENST00000483631 TGDSO95455 350 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 LY6G6DO95868 133 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 HNRNPCL4P0DMR1 293 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 IMPDH2P12268 514 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 CRATP43155 626 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 FADDQ13158 208 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 LARS2Q15031 903 aaKnown RBP17.5■□□□□ 0.39
HPS4-213ENST00000483631 WBP2NLQ6ICG8 309 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 UBE2J2Q8N2K1 259 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 SLC38A5Q8WUX1 472 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 ZBTB9Q96C00 473 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 C7orf26Q96N11 449 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 MUS81Q96NY9 551 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 OR52B2Q96RD2 323 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 SF3B5Q9BWJ5 86 aaKnown RBP17.5■□□□□ 0.39
HPS4-213ENST00000483631 AMBRA1Q9C0C7 1298 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 RAD21L1Q9H4I0 556 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 FAIMQ9NVQ4 179 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms