RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 DPP4P27487 766 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ADH6P28332 368 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 IFNGR2P38484 337 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 CAPGP40121 348 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 APOBEC1P41238 236 aaKnown RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 GPR4P46093 362 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 MASP1P48740 699 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ZNF41P51814 821 aaPredicted RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 RAD23AP54725 363 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 UCNP55089 124 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 TMPRSS3P57727 454 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 CRYZQ08257 329 aaKnown RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 COX10Q12887 443 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ZNF74Q16587 644 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 TBR1Q16650 682 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ELOA3BQ3SY89 546 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 GLYR1Q49A26 553 aaPredicted RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 CMPK2Q5EBM0 449 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ZNF766Q5HY98 468 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 BROXQ5VW32 411 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 C1QL3Q5VWW1 255 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 BORAQ6PGQ7 559 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 Q6ZPB1 254 aaPredicted RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 RASSF6Q6ZTQ3 369 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 CCDC71Q8IV32 467 aaPredicted RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 CLDN22Q8N7P3 220 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ELOA3Q8NG57 546 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 OR8D4Q8NGM9 314 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 OR6S1Q8NH40 331 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 RNF217Q8TC41 542 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 STK35Q8TDR2 534 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 KTI12Q96EK9 354 aaPredicted RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 ANKRD60Q9BZ19 345 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 PLA2G12AQ9BZM1 189 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 PTGES2Q9H7Z7 377 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 KLHL1Q9NR64 748 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 FAM118AQ9NWS6 357 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 SELENONQ9NZV5 590 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 CHRNA9Q9UGM1 479 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 RAB26Q9ULW5 256 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 BOKQ9UMX3 212 aaPredicted RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 TMEM5Q9Y2B1 443 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 MRPS18CQ9Y3D5 142 aaKnown RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 EML6Q6ZMW3 1958 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ACACAQ13085 2346 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 TRAV36DV7A0A075B6V5 113 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 OR2M5A3KFT3 312 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 ZAR1LA6NP61 321 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 A8MVM7 634 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 FTCDNL1E5RQL4 147 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 OR7A10O76100 309 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 HPNP05981 417 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 GNAO1P09471 354 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 ACADSP16219 412 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 HK1P19367 917 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 CCNA2P20248 432 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 CXCR1P25024 350 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 ELK4P28324 431 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 SHC1P29353 583 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 EIF1P41567 113 aaKnown RBP7.44□□□□□ -1.22
USP4-210ENST00000483212 MEOX1P50221 254 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 MAP2K6P52564 334 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 CRISP1P54107 249 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 ESRRGP62508 458 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 RPS4XP62701 263 aaKnown RBP7.44□□□□□ -1.22
USP4-210ENST00000483212 NPRL3Q12980 569 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 SELENBP1Q13228 472 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 POMZP3Q6PJE2 187 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 ZNF620Q6ZNG0 422 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 LRRC69Q6ZNQ3 347 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 RRM2BQ7LG56 351 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 DHRSXQ8N5I4 330 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 TMEM251Q8N6I4 163 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 TMEM178AQ8NBL3 297 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 FAM83FQ8NEG4 500 aaPredicted RBP7.44□□□□□ -1.22
USP4-210ENST00000483212 OR5M1Q8NGP8 315 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 OR13C2Q8NGS9 318 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 ZCCHC14Q8WYQ9 949 aaKnown RBP7.44□□□□□ -1.22
USP4-210ENST00000483212 TAAR8Q969N4 342 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 SGTBQ96EQ0 304 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 JSRP1Q96MG2 331 aaPredicted RBP7.44□□□□□ -1.22
USP4-210ENST00000483212 C5orf34Q96MH7 638 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 MOGAT1Q96PD6 335 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 TTTY12Q9BZ98 90 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 OR11A1Q9GZK7 315 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.44□□□□□ -1.22
USP4-210ENST00000483212 RIBC2Q9H4K1 309 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 EGLN3Q9H6Z9 239 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 ZNF556Q9HAH1 456 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 MCCC2Q9HCC0 563 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 KRCC1Q9NPI7 259 aaPredicted RBP7.44□□□□□ -1.22
USP4-210ENST00000483212 IL20Q9NYY1 176 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 DKKL1Q9UK85 242 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 NDRG4Q9ULP0 352 aaKnown RBP7.44□□□□□ -1.22
USP4-210ENST00000483212 SIGLEC7Q9Y286 467 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 PCDHGB5Q9Y5G0 923 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 CDH10Q9Y6N8 788 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 MGAQ8IWI9 3026 aa7.44□□□□□ -1.22
USP4-210ENST00000483212 NCKAP5O14513 1909 aa7.43□□□□□ -1.22
USP4-210ENST00000483212 TNRC6AQ8NDV7 1962 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms