RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 LINC01560Q8TB33 94 aa13.46□□□□□ -0.25
COL16A1-213ENST00000482910 PIGXQ8TBF5 258 aa13.46□□□□□ -0.25
COL16A1-213ENST00000482910 LRRC58Q96CX6 371 aa13.46□□□□□ -0.25
COL16A1-213ENST00000482910 OR11A1Q9GZK7 315 aa13.46□□□□□ -0.25
COL16A1-213ENST00000482910 OR10A4Q9H209 315 aa13.46□□□□□ -0.25
COL16A1-213ENST00000482910 NANOGQ9H9S0 305 aa13.46□□□□□ -0.25
COL16A1-213ENST00000482910 C12orf10Q9HB07 376 aa13.46□□□□□ -0.25
COL16A1-213ENST00000482910 RASSF1Q9NS23 344 aa13.46□□□□□ -0.25
COL16A1-213ENST00000482910 ING1Q9UK53 422 aaPredicted RBP13.46□□□□□ -0.25
COL16A1-213ENST00000482910 TESMINQ9Y4I5 508 aa13.46□□□□□ -0.25
COL16A1-213ENST00000482910 LRBAP50851 2863 aa13.46□□□□□ -0.25
COL16A1-213ENST00000482910 IGHV3-15A0A0B4J1V0 119 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 C16orf97H3BN30 126 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 MRASO14807 208 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 EIF1BO60739 113 aaKnown RBP13.45□□□□□ -0.26
COL16A1-213ENST00000482910 MFN2O95140 757 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 CXCR1P25024 350 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 CCKARP32238 428 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 PCGF2P35227 344 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 KCNJ5P48544 419 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 SLC16A1P53985 500 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 KRTAP10-9P60411 292 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 SLC35A1P78382 337 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 H3F3AP84243 136 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 SF3A3Q12874 501 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL16A1-213ENST00000482910 CAPRIN1Q14444 709 aaKnown RBP13.45□□□□□ -0.26
COL16A1-213ENST00000482910 INTS11Q5TA45 600 aaKnown RBP13.45□□□□□ -0.26
COL16A1-213ENST00000482910 C6orf89Q6UWU4 347 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 TFAP2EQ6VUC0 442 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 TMEM200AQ86VY9 491 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 SNX32Q86XE0 403 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 CADM2Q8N3J6 435 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 C3orf49Q96BT1 292 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 RSPO3Q9BXY4 272 aaPredicted RBP13.45□□□□□ -0.26
COL16A1-213ENST00000482910 GID8Q9NWU2 228 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 KLHL28Q9NXS3 571 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 SPG11Q96JI7 2443 aa13.45□□□□□ -0.26
COL16A1-213ENST00000482910 A8MVM7 634 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 TMEM229AB2RXF0 380 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 C8BP07358 591 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 PPP3CBP16298 524 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 PSMB1P20618 241 aaKnown RBP13.44□□□□□ -0.26
COL16A1-213ENST00000482910 GZMMP51124 257 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 PAQR6Q6TCH4 344 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 NUFIP2Q7Z417 695 aaKnown RBP13.44□□□□□ -0.26
COL16A1-213ENST00000482910 SPATA21Q7Z572 469 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 PATL1Q86TB9 770 aaKnown RBP13.44□□□□□ -0.26
COL16A1-213ENST00000482910 ATG4DQ86TL0 474 aaPredicted RBP13.44□□□□□ -0.26
COL16A1-213ENST00000482910 CALHM3Q86XJ0 350 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 ARMC8Q8IUR7 673 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 OR10A6Q8NH74 314 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 RP9Q8TA86 221 aaKnown RBP13.44□□□□□ -0.26
COL16A1-213ENST00000482910 STK35Q8TDR2 534 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 TRIM2Q9C040 744 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 EMC3Q9P0I2 261 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 TESQ9UGI8 421 aaKnown RBP13.44□□□□□ -0.26
COL16A1-213ENST00000482910 PDZD2O15018 2839 aa13.44□□□□□ -0.26
COL16A1-213ENST00000482910 LOC100653049A0A140TA62 436 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 ZC3H12DA2A288 527 aaKnown RBP13.43□□□□□ -0.26
COL16A1-213ENST00000482910 ZNF716A6NP11 495 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 DYNC1I1O14576 645 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 GPR171O14626 319 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 CASKO14936 926 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 FRS3O43559 492 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 TPST1O60507 370 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 ANKRD17O75179 2603 aaKnown RBP13.43□□□□□ -0.26
COL16A1-213ENST00000482910 NPIPB7O75200 414 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 KRT34O76011 436 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 TACC2O95359 2948 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 CNOT4O95628 575 aaKnown RBP13.43□□□□□ -0.26
COL16A1-213ENST00000482910 GPIP06744 558 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 IMPDH2P12268 514 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 KLK2P20151 261 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 CCNA2P20248 432 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 AQP1P29972 269 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 IDUAP35475 653 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 OR3A2P47893 321 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 OR2B6P58173 313 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 DMTNQ08495 405 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 VMACQ2NL98 169 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 ERICH5Q6P6B1 374 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 C5orf46Q6UWT4 87 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 STAC2Q6ZMT1 411 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 CCDC80Q76M96 950 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 COMTD1Q86VU5 262 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 GABRG1Q8N1C3 465 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 DNAJA4Q8WW22 397 aaPredicted RBP13.43□□□□□ -0.26
COL16A1-213ENST00000482910 USB1Q9BQ65 265 aaKnown RBP13.43□□□□□ -0.26
COL16A1-213ENST00000482910 ECSITQ9BQ95 431 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 GPATCH1Q9BRR8 931 aaKnown RBP13.43□□□□□ -0.26
COL16A1-213ENST00000482910 NAA11Q9BSU3 229 aaPredicted RBP13.43□□□□□ -0.26
COL16A1-213ENST00000482910 HDHD5Q9BXW7 423 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 NSRP1Q9H0G5 558 aaKnown RBP13.43□□□□□ -0.26
COL16A1-213ENST00000482910 CLEC4MQ9H2X3 399 aaPredicted RBP13.43□□□□□ -0.26
COL16A1-213ENST00000482910 PIF1Q9H611 641 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 C12orf49Q9H741 205 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 ZNF226Q9NYT6 803 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 SLC13A4Q9UKG4 626 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 AP3M1Q9Y2T2 418 aa13.43□□□□□ -0.26
COL16A1-213ENST00000482910 GPR52Q9Y2T5 361 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms