RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 A0A087WUU8 490 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 LGI1O95970 557 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 CISD3P0C7P0 127 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 NID1P14543 1247 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 AMY2BP19961 511 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 CAPZA1P52907 286 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 SNU13P55769 128 aaKnown RBP13.18□□□□□ -0.3
NPHP4-208ENST00000478423 GXYLT1Q4G148 440 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 SLC6A19Q695T7 634 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 ANKRD34AQ69YU3 496 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 NMNAT3Q96T66 252 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 TAS2R8Q9NYW2 309 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 HHLA2Q9UM44 414 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 SLC6A5Q9Y345 797 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 SNX11Q9Y5W9 270 aa13.18□□□□□ -0.3
NPHP4-208ENST00000478423 TMEM72A0PK05 275 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 CD63P08962 238 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 FPR3P25089 353 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 UGT2B10P36537 528 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 CCR5P51681 352 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 SLX4IPQ5VYV7 408 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 AWAT2Q6E213 333 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 OR6Q1Q8NGQ2 317 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF582Q96NG8 517 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-208ENST00000478423 MEPEQ9NQ76 525 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-208ENST00000478423 SPAG17Q6Q759 2223 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ZSCAN5BA6NJL1 495 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 TMX2-CTNND1H3BSU7 103 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 SOCS6O14544 535 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 IL1AP01583 271 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 GDF1P27539 372 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ACTBP60709 375 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 UBE2NP61088 152 aaKnown RBP13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ACTG1P63261 375 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 OR7G2Q8NG99 324 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 BORCS8Q96FH0 119 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 SLC25A44Q96H78 314 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF442Q9H7R0 627 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ACAD8Q9UKU7 415 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 KCNIP3Q9Y2W7 256 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 A0A1B0GX78 115 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 CREBL2O60519 120 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-208ENST00000478423 MPIG6BO95866 241 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF16P17020 682 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-208ENST00000478423 TRIM23P36406 574 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 PTH2RP49190 550 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 MAN2A2P49641 1150 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 CAV3P56539 151 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 GRK1Q15835 563 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 NKAIN1Q4KMZ8 207 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 SLC22A10Q63ZE4 541 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ZNF775Q96BV0 537 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-208ENST00000478423 SLC35A4Q96G79 324 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ALG12Q9BV10 488 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 B3GNT3Q9Y2A9 372 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 SLC17A4Q9Y2C5 497 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
NPHP4-208ENST00000478423 TMEM269A0A1B0GVZ9 245 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 GGT3PA6NGU5 568 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 SLC2A5P22732 501 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 FNTBP49356 437 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 YBX1P67809 324 aaKnown RBP13.17□□□□□ -0.3
NPHP4-208ENST00000478423 CSNK2A1P68400 391 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-208ENST00000478423 FOXK2Q01167 660 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 C3orf38Q5JPI3 329 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 FAM205BPQ63HN1 556 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 TMEM205Q6UW68 189 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 SLC35D2Q76EJ3 337 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 PRICKLE2Q7Z3G6 844 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ZSCAN1Q8NBB4 408 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 GAB3Q8WWW8 586 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 SPTSSAQ969W0 71 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 OR10A4Q9H209 315 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ELOVL3Q9HB03 270 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 ATP13A2Q9NQ11 1180 aa13.17□□□□□ -0.3
NPHP4-208ENST00000478423 UNC13CQ8NB66 2214 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 SUSD5O60279 629 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 AMY2AP04746 511 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 GABRG2P18507 467 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 MAKP20794 623 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 NXNL2Q5VZ03 156 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 ANKRD19PQ9H560 264 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 SLC6A20Q9NP91 592 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 MGAT4CQ9UBM8 478 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 IGHV3-20A0A0C4DH32 117 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 G3V3Y1 287 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 C17orf67Q0P5P2 114 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 DCAF12Q5T6F0 453 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 TMEM244Q5VVB8 128 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 TCTN3Q6NUS6 607 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 MTFR2Q6P444 385 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 DPY19L4Q7Z388 723 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 ABHD12BQ7Z5M8 362 aaPredicted RBP13.16□□□□□ -0.3
NPHP4-208ENST00000478423 PTOV1Q86YD1 416 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 RCBTB1Q8NDN9 531 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 CENPOQ9BU64 300 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 SEMA4GQ9NTN9 838 aa13.16□□□□□ -0.3
NPHP4-208ENST00000478423 PCDHGA6Q9Y5G7 932 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms