RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 LEF1Q9UJU2 399 aaPredicted RBP10.38□□□□□ -0.75
SKI-202ENST00000478223 CHD3Q12873 2000 aaKnown RBP10.38□□□□□ -0.75
SKI-202ENST00000478223 TMEM247A6NEH6 219 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 ZNF208O43345 1280 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 HTR2AP28223 471 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 AQP1P29972 269 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 HTR3AP46098 478 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 OR2B6P58173 313 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 CSNK2A1P68400 391 aaPredicted RBP10.37□□□□□ -0.75
SKI-202ENST00000478223 IRX1P78414 480 aaPredicted RBP10.37□□□□□ -0.75
SKI-202ENST00000478223 SCARB2Q14108 478 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 CAPRIN1Q14444 709 aaKnown RBP10.37□□□□□ -0.75
SKI-202ENST00000478223 LARS2Q15031 903 aaKnown RBP10.37□□□□□ -0.75
SKI-202ENST00000478223 PRAMEF8Q5VWM4 474 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 PRAMEF7Q5VXH5 474 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 FBXW10Q5XX13 1052 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 PAMR1Q6UXH9 720 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 BEND4Q6ZU67 534 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 MTDHQ86UE4 582 aaKnown RBP10.37□□□□□ -0.75
SKI-202ENST00000478223 ZNF440Q8IYI8 595 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 SLC43A2Q8N370 569 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 C3orf49Q96BT1 292 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 PIK3IP1Q96FE7 263 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 ANKRD27Q96NW4 1050 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 CGREF1Q99674 301 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 ACTR6Q9GZN1 396 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 RABEP2Q9H5N1 569 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 TMEM38AQ9H6F2 299 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 GP6Q9HCN6 339 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 TMEM181Q9P2C4 612 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 KLHL9Q9P2J3 617 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 NDUFAF1Q9Y375 327 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 HDGFL3Q9Y3E1 203 aa10.37□□□□□ -0.75
SKI-202ENST00000478223 SPIN1Q9Y657 262 aaPredicted RBP10.37□□□□□ -0.75
SKI-202ENST00000478223 IGKV3D-15A0A087WSY6 115 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 ZNF724A8MTY0 619 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 TMEM229AB2RXF0 380 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 C5orf58C9J3I9 102 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 ANGPT2O15123 496 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 KLF4O43474 513 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 TPST2O60704 377 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 ATE1O95260 518 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 ADAP00813 363 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 IGHV3-9P01782 118 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 VIMP08670 466 aaKnown RBP10.36□□□□□ -0.75
SKI-202ENST00000478223 ETS2P15036 469 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 FPR1P21462 350 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 PPIBP23284 216 aaKnown RBP10.36□□□□□ -0.75
SKI-202ENST00000478223 OR3A2P47893 321 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 ART1P52961 327 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 ARFIP2P53365 341 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 H3F3AP84243 136 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 DMTNQ08495 405 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 WBP2NLQ6ICG8 309 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 REEP3Q6NUK4 255 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 SEZ6L2Q6UXD5 910 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 ATG4DQ86TL0 474 aaPredicted RBP10.36□□□□□ -0.75
SKI-202ENST00000478223 S100PBPQ96BU1 408 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 DDIT4LQ96D03 193 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 CCDC134Q9H6E4 229 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 SAR1AQ9NR31 198 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 TRIM33Q9UPN9 1127 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 USP22Q9UPT9 525 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 IFT52Q9Y366 437 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 ALPK2Q86TB3 2170 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 ARID1AO14497 2285 aa10.36□□□□□ -0.75
SKI-202ENST00000478223 LIPT2A6NK58 231 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 EVPLLA8MZ36 301 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 FXYD1O00168 92 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 CASKO14936 926 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 LYZL6O75951 148 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 AKR7A3O95154 331 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 PLAUP00749 431 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 OPN1SWP03999 348 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 TROVE2P10155 538 aaKnown RBP eCLIP10.35□□□□□ -0.756e-7■■■■■ 32.1
SKI-202ENST00000478223 UQCRBP14927 111 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 PSMB1P20618 241 aaKnown RBP10.35□□□□□ -0.75
SKI-202ENST00000478223 CXCR1P25024 350 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 ADSLP30566 484 aaPredicted RBP10.35□□□□□ -0.75
SKI-202ENST00000478223 PRKAR1BP31321 381 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 CLK1P49759 484 aaKnown RBP10.35□□□□□ -0.75
SKI-202ENST00000478223 GZMMP51124 257 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 SLC16A1P53985 500 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 FOXG1P55316 489 aaPredicted RBP10.35□□□□□ -0.75
SKI-202ENST00000478223 PCBP3P57721 371 aaKnown RBP10.35□□□□□ -0.75
SKI-202ENST00000478223 EGR4Q05215 589 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 KLF10Q13118 480 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 NFYCQ13952 458 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 CEACAM7Q14002 265 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 OR7A5Q15622 319 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 SFRP5Q5T4F7 317 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 METTL21CQ5VZV1 264 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 REP15Q6BDI9 236 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 STK32CQ86UX6 486 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 WFDC8Q8IUA0 241 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 TMEM99Q8N816 258 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 SMYD1Q8NB12 490 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 C10orf82Q8WW14 230 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 NINJ1Q92982 152 aa10.35□□□□□ -0.75
SKI-202ENST00000478223 ZNF317Q96PQ6 595 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms