RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 OR2B6P58173 313 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 DMTNQ08495 405 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 RASGEF1BQ0VAM2 473 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 MTDHQ86UE4 582 aaKnown RBP13.88□□□□□ -0.19
HMGA1-206ENST00000478214 TMEM200AQ86VY9 491 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 ARMC8Q8IUR7 673 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 SLC35B4Q969S0 331 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 C3orf49Q96BT1 292 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 ZNF775Q96BV0 537 aaPredicted RBP13.88□□□□□ -0.19
HMGA1-206ENST00000478214 DDIT4LQ96D03 193 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 PSD2Q9BQI7 771 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 GP6Q9HCN6 339 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 ELOVL5Q9NYP7 299 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 TMEM181Q9P2C4 612 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 KLHL9Q9P2J3 617 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 PRDM4Q9UKN5 801 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 CSMD2Q7Z408 3487 aa13.88□□□□□ -0.19
HMGA1-206ENST00000478214 PRORSD1PA6NEY8 169 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 DYNC1I1O14576 645 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 CCDC22O60826 627 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 SERPINB7O75635 380 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 NPPAP01160 153 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 OPN1SWP03999 348 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 YES1P07947 543 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 CCKARP32238 428 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 PCYT1AP49585 367 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 MAP2K6P52564 334 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 BNIP2Q12982 314 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 ABLIM2Q6H8Q1 611 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 ATG4DQ86TL0 474 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-206ENST00000478214 SMYD1Q8NB12 490 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 PCYOX1LQ8NBM8 494 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 OR8J3Q8NGG0 315 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 RCN3Q96D15 328 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 ZHX1-C8orf76Q96EF9 292 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 ZNF300Q96RE9 604 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-206ENST00000478214 SH3GL1Q99961 368 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 WFDC6Q9BQY6 131 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 GPATCH1Q9BRR8 931 aaKnown RBP13.87□□□□□ -0.19
HMGA1-206ENST00000478214 PRR14Q9BWN1 585 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 BCO1Q9HAY6 547 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 TRAPPC4Q9Y296 219 aa13.87□□□□□ -0.19
HMGA1-206ENST00000478214 PDZD2O15018 2839 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 CREBBPQ92793 2442 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 MPDZO75970 2070 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 SH3D21A4FU49 640 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 A6NNC1 897 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 ZNF814B7Z6K7 855 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 C16orf97H3BN30 126 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 M0QX08 132 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 DNPH1O43598 174 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 RAMP1O60894 148 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 CTAG2O75638 210 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 COX4I1P13073 169 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 HTR2AP28223 471 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 PCGF2P35227 344 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 UGT2B10P36537 528 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 DAZAP2Q15038 168 aaPredicted RBP13.86□□□□□ -0.19
HMGA1-206ENST00000478214 VMACQ2NL98 169 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 TFAP2EQ6VUC0 442 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 STK32CQ86UX6 486 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 CALHM3Q86XJ0 350 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 TREML1Q86YW5 311 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 CCDC103Q8IW40 242 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 RP9Q8TA86 221 aaKnown RBP13.86□□□□□ -0.19
HMGA1-206ENST00000478214 DACH2Q96NX9 599 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 ECSITQ9BQ95 431 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 POTEKPQ9BYX7 375 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 KLHL4Q9C0H6 718 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 GID8Q9NWU2 228 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 SLC13A4Q9UKG4 626 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 USP22Q9UPT9 525 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 SPG11Q96JI7 2443 aa13.86□□□□□ -0.19
HMGA1-206ENST00000478214 A0A1B0GWA3 101 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 FAM221AA4D161 298 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 GMNCA6NCL1 334 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 ZNF716A6NP11 495 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 A8MVM7 634 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 TMEM229AB2RXF0 380 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 FPR1P21462 350 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 EDNRAP25101 427 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 RGS8P57771 180 aaPredicted RBP13.85□□□□□ -0.19
HMGA1-206ENST00000478214 GNGT1P63211 74 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 SLC35A1P78382 337 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 H3F3AP84243 136 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 DUSP7Q16829 419 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 ANKRD34AQ69YU3 496 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 STAC2Q6ZMT1 411 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 BEND4Q6ZU67 534 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 CPLX4Q7Z7G2 160 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 PATL1Q86TB9 770 aaKnown RBP13.85□□□□□ -0.19
HMGA1-206ENST00000478214 SLC30A8Q8IWU4 369 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 BHLHE22Q8NFJ8 381 aaPredicted RBP13.85□□□□□ -0.19
HMGA1-206ENST00000478214 GPR32P1Q8NGA4 272 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 OR52E4Q8NGH9 312 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 WFIKKN1Q96NZ8 548 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 TACO1Q9BSH4 297 aaKnown RBP13.85□□□□□ -0.19
HMGA1-206ENST00000478214 TRIM2Q9C040 744 aa13.85□□□□□ -0.19
HMGA1-206ENST00000478214 NSRP1Q9H0G5 558 aaKnown RBP13.85□□□□□ -0.19
HMGA1-206ENST00000478214 RASSF1Q9NS23 344 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms