RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 NAAAQ02083 359 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 CLEC6AQ6EIG7 209 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 SHQ1Q6PI26 577 aaKnown RBP17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 VHLLQ6RSH7 139 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 PEG10Q86TG7 708 aaKnown RBP17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 FAM71CQ8NEG0 241 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 SFXN5Q8TD22 340 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 WDR60Q8WVS4 1066 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 TMEM45BQ96B21 275 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 OR7D2Q96RA2 312 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 ATP6V1HQ9UI12 483 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 PCDHB10Q9UN67 800 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 TRAPPC4Q9Y296 219 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 TMED5Q9Y3A6 229 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 hCG_2039718K7EN88 272 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 SCAMP2O15127 329 aaKnown RBP17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 CDH2P19022 906 aaPredicted RBP17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 PAX7P23759 505 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 HPCAL1P37235 193 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 OR2B6P58173 313 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 SLC17A1Q14916 467 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 C3orf36Q3SXR2 165 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 TBRG1Q3YBR2 411 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 SPDYE7PQ495Y7 208 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 RFTN2Q52LD8 501 aaPredicted RBP17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 EIF3MQ7L2H7 374 aaKnown RBP17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 GRINAQ7Z429 371 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 POMGNT2Q8NAT1 580 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 NUP37Q8NFH4 326 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 OR5D16Q8NGK9 328 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 OR5P2Q8WZ92 322 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 ZNF442Q9H7R0 627 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 TMEM181Q9P2C4 612 aa17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 CRNNQ9UBG3 495 aaPredicted RBP17.55■□□□□ 0.4
PDLIM1-202ENST00000477757 A0A087WUV0 522 aaPredicted RBP17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 EXOC1LA0A1B0GW35 172 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 G3V2L1 256 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 EIF1BO60739 113 aaKnown RBP17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 UGT2B17O75795 530 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 CECR9P0C854 216 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 MYL2P10916 166 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 GCAP28676 217 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 LIMS1P48059 325 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 GPR68Q15743 365 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 AWAT1Q58HT5 328 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 C8orf74Q6P047 294 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 ZYG11AQ6WRX3 759 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 RNF165Q6ZSG1 346 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 ZNF572Q7Z3I7 529 aaPredicted RBP17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 ZCCHC24Q8N2G6 241 aaKnown RBP17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 SVOPLQ8N434 492 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 OR7A2PQ8NGA2 310 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 OR4F15Q8NGB8 312 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 UBASH3BQ8TF42 649 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 TMEM186Q96B77 213 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 MOAP1Q96BY2 351 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 DOK1Q99704 481 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 TSPYL1Q9H0U9 437 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 ZNF696Q9H7X3 374 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 HIF1ANQ9NWT6 349 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 EMCNQ9ULC0 261 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 GRIP1Q9Y3R0 1128 aa17.54■□□□□ 0.4
PDLIM1-202ENST00000477757 LSM1O15116 133 aaKnown RBP17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 STX11O75558 287 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 AK1P00568 194 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 IGLV1-44P01699 117 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 IGFBP1P08833 259 aaPredicted RBP17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 BCKDHAP12694 445 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 CALCRP30988 508 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 SLC35A1P78382 337 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 LIPMQ5VYY2 423 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 ANKRD16Q6P6B7 361 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 ABHD12BQ7Z5M8 362 aaPredicted RBP17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 ZNF563Q8TA94 476 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 ZNF350Q9GZX5 532 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 USP22Q9UPT9 525 aa17.53■□□□□ 0.4
PDLIM1-202ENST00000477757 ARPC4-TTLL3A0A0A6YYG9 625 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 TMPRSS2O15393 492 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 FCMRO60667 390 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 MSMBP08118 114 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 LAMP1P11279 417 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 NPR2P20594 1047 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 EPHA1P21709 976 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 PGM1P36871 562 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 RPL3P39023 403 aaKnown RBP17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 HGFACQ04756 655 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 ADRM1Q16186 407 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 CFAP157Q5JU67 520 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 EMBQ6PCB8 327 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 PAQR6Q6TCH4 344 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 ADGRG3Q86Y34 549 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 OR1K1Q8NGR3 316 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 ACMSDQ8TDX5 336 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 OIT3Q8WWZ8 545 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 ZNF317Q96PQ6 595 aaPredicted RBP17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 JMJD8Q96S16 334 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 NAA11Q9BSU3 229 aaPredicted RBP17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 TUBB1Q9H4B7 451 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 SERHL2Q9H4I8 314 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 SEC61A2Q9H9S3 476 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms