RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 OPN4Q9UHM6 478 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 CBLCQ9ULV8 474 aa11.74□□□□□ -0.53
RTFDC1-207ENST00000477573 CCDC187A0A096LP49 1063 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 WNT9AO14904 365 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 SH3BGRLO75368 114 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF682O95780 498 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 OPN1MWP04001 364 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 GSTP1P09211 210 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 CD3GP09693 182 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 OPN1MW2P0DN77 364 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 OPN1MW3P0DN78 364 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF7P17097 686 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 NDUFS1P28331 727 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 BDKRB2P30411 391 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 GABRA5P31644 462 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 VLDLRP98155 873 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 SF1Q15637 639 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 C6orf136Q5SQH8 315 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 KIAA1161Q6NSJ0 714 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 FAM199XQ6PEV8 388 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 PAQR3Q6TCH7 311 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 GLDNQ6ZMI3 551 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 MRPL52Q86TS9 123 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF707Q96C28 371 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 RRNAD1Q96FB5 475 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 LYSMD1Q96S90 227 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 GPR21Q99679 349 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 IKZF5Q9H5V7 419 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 UQCC1Q9NVA1 299 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 OR10H1Q9Y4A9 318 aa11.73□□□□□ -0.53
RTFDC1-207ENST00000477573 MYOFQ9NZM1 2061 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 TRBV5-3A0A0A0MS03 114 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 IFITM10A6NMD0 228 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 MAN2B1O00754 1011 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 EMC8O43402 210 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CREBL2O60519 120 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 PRAMEF12O95522 483 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 NPSP0C0P6 89 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 UROSP10746 265 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 DAOP14920 347 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CTSOP43234 321 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CDKN1CP49918 316 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CCR4P51679 360 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 DLX5P56178 289 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 IL2P60568 153 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 POLR2LP62875 67 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 GPM6BQ13491 265 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CLINT1Q14677 625 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 NKPD1Q17RQ9 610 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 TTLL9Q3SXZ7 439 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CRTC2Q53ET0 693 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 TMEM201Q5SNT2 666 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 LY6G5CQ5SRR4 150 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 ZDHHC20Q5W0Z9 365 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF813Q6ZN06 617 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 SMIM15Q7Z3B0 74 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CBARPQ8N350 705 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CELF5Q8N6W0 485 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 OR56B2PQ8NGI1 322 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 C1GALT1C1Q96EU7 318 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 TRIM2Q9C040 744 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 MFFQ9GZY8 342 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 PRO1933Q9H354 126 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 SERHLQ9NQF3 203 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 SF3B6Q9Y3B4 125 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 HCFC2Q9Y5Z7 792 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 FXYD6-FXYD2A0A087WZ82 144 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 H0YIV9 168 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 BNIP3LO60238 219 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 GGCTO75223 188 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 NXPH2O95156 264 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 BPNT1O95861 308 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 IL5P05113 134 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 IDSP22304 550 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 SERPINF1P36955 418 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 SNRPGP62308 76 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 NTHL1P78549 312 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CDK6Q00534 326 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 ACSM1Q08AH1 577 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 KIAA0040Q15053 153 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 C14orf28Q4W4Y0 310 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 HIST2H3PS2Q5TEC6 136 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 FAM151BQ6UXP7 276 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 B3GLCTQ6Y288 498 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 IL34Q6ZMJ4 242 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 TPRG1Q6ZUI0 275 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 OR2W3Q7Z3T1 314 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 PARGQ86W56 976 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 SIAH3Q8IW03 269 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 ZNF283Q8N7M2 679 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 HSD17B11Q8NBQ5 300 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 DNAAF1Q8NEP3 725 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 OR5T1Q8NG75 326 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 ECHDC3Q96DC8 303 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 PTCHD1Q96NR3 888 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 CLCC1Q96S66 551 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 FEVQ99581 238 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 ATG101Q9BSB4 218 aa11.72□□□□□ -0.53
RTFDC1-207ENST00000477573 RSRP1Q9BUV0 290 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms