RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 SEC24CP53992 1094 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 PCBP3P57721 371 aaKnown RBP11.97□□□□□ -0.49
ACTN4-205ENST00000477174 SLC35A1P78382 337 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 RASGEF1BQ0VAM2 473 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 SELPLGQ14242 412 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 CAPRIN1Q14444 709 aaKnown RBP11.97□□□□□ -0.49
ACTN4-205ENST00000477174 PDK3Q15120 406 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 BEND4Q6ZU67 534 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 SPATA21Q7Z572 469 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 SNX32Q86XE0 403 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 ARMC8Q8IUR7 673 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 TUSC5Q8IXB3 177 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 CADM2Q8N3J6 435 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 LSMEM1Q8N8F7 131 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 LINC01560Q8TB33 94 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 LURAP1Q96LR2 239 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 ELAC2Q9BQ52 826 aaKnown RBP11.97□□□□□ -0.49
ACTN4-205ENST00000477174 ECSITQ9BQ95 431 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 RSPO3Q9BXY4 272 aaPredicted RBP11.97□□□□□ -0.49
ACTN4-205ENST00000477174 OR11A1Q9GZK7 315 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 KLHL28Q9NXS3 571 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 ARMCX1Q9P291 453 aa11.97□□□□□ -0.49
ACTN4-205ENST00000477174 MPDZO75970 2070 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 A8MVM7 634 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 M0QX08 132 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 FXYD1O00168 92 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 CASKO14936 926 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 TPST1O60507 370 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 GOSR1O95249 250 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 FESP07332 822 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 C8BP07358 591 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 AQP1P29972 269 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 H3F3AP84243 136 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 INTS11Q5TA45 600 aaKnown RBP11.96□□□□□ -0.49
ACTN4-205ENST00000477174 REP15Q6BDI9 236 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 CPLX4Q7Z7G2 160 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 PATL1Q86TB9 770 aaKnown RBP11.96□□□□□ -0.49
ACTN4-205ENST00000477174 DNAJA4Q8WW22 397 aaPredicted RBP11.96□□□□□ -0.49
ACTN4-205ENST00000477174 C3orf49Q96BT1 292 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 PSD2Q9BQI7 771 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 TRIM2Q9C040 744 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 C12orf10Q9HB07 376 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 ING1Q9UK53 422 aaPredicted RBP11.96□□□□□ -0.49
ACTN4-205ENST00000477174 SLC13A4Q9UKG4 626 aa11.96□□□□□ -0.49
ACTN4-205ENST00000477174 SPG11Q96JI7 2443 aa11.96□□□□□ -0.5
ACTN4-205ENST00000477174 IGKV3D-15A0A087WSY6 115 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 IGHV3-15A0A0B4J1V0 119 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 SH3D21A4FU49 640 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 A6NNC1 897 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 GCM2O75603 506 aaPredicted RBP11.95□□□□□ -0.5
ACTN4-205ENST00000477174 GPIP06744 558 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 PCGF2P35227 344 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 OR2B6P58173 313 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 HOXC5Q00444 222 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 DMTNQ08495 405 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 VMACQ2NL98 169 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 RABL3Q5HYI8 236 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 CCDC80Q76M96 950 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 NUFIP2Q7Z417 695 aaKnown RBP11.95□□□□□ -0.5
ACTN4-205ENST00000477174 GALNT5Q7Z7M9 940 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 ATG4DQ86TL0 474 aaPredicted RBP11.95□□□□□ -0.5
ACTN4-205ENST00000477174 CALHM3Q86XJ0 350 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 OR52E4Q8NGH9 312 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 PIGXQ8TBF5 258 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 STK35Q8TDR2 534 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 NAA11Q9BSU3 229 aaPredicted RBP11.95□□□□□ -0.5
ACTN4-205ENST00000477174 HDHD5Q9BXW7 423 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 NSRP1Q9H0G5 558 aaKnown RBP11.95□□□□□ -0.5
ACTN4-205ENST00000477174 RASSF1Q9NS23 344 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 EMC3Q9P0I2 261 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 RPS6KB2Q9UBS0 482 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 AP3M1Q9Y2T2 418 aa11.95□□□□□ -0.5
ACTN4-205ENST00000477174 ZC3H12DA2A288 527 aaKnown RBP11.94□□□□□ -0.5
ACTN4-205ENST00000477174 LIPT2A6NK58 231 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 GPR171O14626 319 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 FRS3O43559 492 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 SNX3O60493 162 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 FMO6PO60774 539 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 NPIPB7O75200 414 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 CNOT4O95628 575 aaKnown RBP11.94□□□□□ -0.5
ACTN4-205ENST00000477174 LGI1O95970 557 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 PNMTP11086 282 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 IMPDH2P12268 514 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 COX4I1P13073 169 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 PPP3CBP16298 524 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 FPR1P21462 350 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 DRD4P21917 467 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 IDUAP35475 653 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 SLC16A1P53985 500 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 KRTAP10-9P60411 292 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 VEZF1Q14119 521 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 P2RY6Q15077 328 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 DUSP7Q16829 419 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 EXOC3L2Q2M3D2 409 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 GLIPR1L2Q4G1C9 344 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 ABLIM2Q6H8Q1 611 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 ERICH5Q6P6B1 374 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 ULK3Q6PHR2 472 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 PAQR6Q6TCH4 344 aa11.94□□□□□ -0.5
ACTN4-205ENST00000477174 C6orf89Q6UWU4 347 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms