RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 C1orf162Q8NEQ5 155 aaPredicted RBP11.5□□□□□ -0.57
MRPL55-228ENST00000476267 OR52E4Q8NGH9 312 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 ZNF563Q8TA94 476 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 CNOT9Q92600 299 aaKnown RBP11.5□□□□□ -0.57
MRPL55-228ENST00000476267 HTRA1Q92743 480 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 ZHX1-C8orf76Q96EF9 292 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 BOD1Q96IK1 185 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 PKNOX2Q96KN3 472 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 TNFRSF13CQ96RJ3 184 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 SORT1Q99523 831 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 INPP5KQ9BT40 448 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 DPY30Q9C005 99 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 SLC38A1Q9H2H9 487 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 TMEM160Q9NX00 188 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 TMEM181Q9P2C4 612 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 HAO1Q9UJM8 370 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 DCTN4Q9UJW0 460 aa11.5□□□□□ -0.57
MRPL55-228ENST00000476267 TMED7-TICAM2A0A0A6YYA0 188 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 CIB4A0PJX0 185 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 TMEM72A0PK05 275 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 AGAP5A6NIR3 686 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 FAAHO00519 579 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 ZNF208O43345 1280 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 MRPL33O75394 65 aaKnown RBP11.49□□□□□ -0.57
MRPL55-228ENST00000476267 TFPIP10646 304 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 IDH2P48735 452 aaKnown RBP11.49□□□□□ -0.57
MRPL55-228ENST00000476267 KHKP50053 298 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 SLC17A1Q14916 467 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 MAPK11Q15759 364 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 CHRFAM7AQ494W8 412 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 ATAD3BQ5T9A4 648 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 TSPO2Q5TGU0 170 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 ANXA8L1Q5VT79 327 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 SLC22A25Q6T423 547 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 KLHL17Q6TDP4 642 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 C17orf78Q8N4C9 275 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 ARFGAP2Q8N6H7 521 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 C10orf105Q8TEF2 133 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 AENQ8WTP8 325 aaKnown RBP11.49□□□□□ -0.57
MRPL55-228ENST00000476267 TMEM45BQ96B21 275 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 TEX37Q96LM6 180 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 PPP1R36Q96LQ0 422 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 CCDC115Q96NT0 180 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 TMEM109Q9BVC6 243 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 SLC17A5Q9NRA2 495 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 SLC7A10Q9NS82 523 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.49□□□□□ -0.57
MRPL55-228ENST00000476267 BTNL2Q9UIR0 455 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 OSGIN1Q9UJX0 560 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 PCDHGB4Q9UN71 923 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 SLC9A8Q9Y2E8 581 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 TMED7Q9Y3B3 224 aa11.49□□□□□ -0.57
MRPL55-228ENST00000476267 SONP18583 2426 aaKnown RBP11.48□□□□□ -0.57
MRPL55-228ENST00000476267 ZC3H12DA2A288 527 aaKnown RBP11.48□□□□□ -0.57
MRPL55-228ENST00000476267 CCT8L1PA6NM43 557 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 RNF212BA8MTL3 300 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 M0R1B8 84 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 CPSF4O95639 269 aaKnown RBP11.48□□□□□ -0.57
MRPL55-228ENST00000476267 IFNA2P01563 188 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 SERPINE1P05121 402 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 CHRM4P08173 479 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 FAM157CP0CG43 387 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 SLC25A16P16260 332 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 MAGEA8P43361 318 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 HTR3AP46098 478 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 FABP6P51161 128 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 ABCE1P61221 599 aaKnown RBP11.48□□□□□ -0.57
MRPL55-228ENST00000476267 SYPL1Q16563 259 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 DPY19L1Q2PZI1 675 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 C1QTNF12Q5T7M4 302 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 OGFOD2Q6N063 350 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 CLEC2AQ6UVW9 174 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 NUDCD3Q8IVD9 361 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 CMIPQ8IY22 773 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 FBXL14Q8N1E6 418 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 ANKFN1Q8N957 763 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 ZIC4Q8N9L1 334 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 NANOS1Q8WY41 292 aaKnown RBP11.48□□□□□ -0.57
MRPL55-228ENST00000476267 TRNT1Q96Q11 434 aaKnown RBP11.48□□□□□ -0.57
MRPL55-228ENST00000476267 SLC35A5Q9BS91 424 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 ADAM19Q9H013 955 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 MARCOQ9UEW3 520 aaPredicted RBP11.48□□□□□ -0.57
MRPL55-228ENST00000476267 AMDHD2Q9Y303 409 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 RAP2CQ9Y3L5 183 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 RTTNQ86VV8 2226 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 ABCA1O95477 2261 aa11.48□□□□□ -0.57
MRPL55-228ENST00000476267 VWC2LB2RUY7 222 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 E9PBE3 544 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 BIRC5O15392 142 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 EIF1BO60739 113 aaKnown RBP11.47□□□□□ -0.57
MRPL55-228ENST00000476267 ALDOCP09972 364 aaKnown RBP11.47□□□□□ -0.57
MRPL55-228ENST00000476267 CCNA2P20248 432 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 TACR3P29371 465 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 IL12AP29459 219 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 SLC1A3P43003 542 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 RPL14P50914 215 aaKnown RBP11.47□□□□□ -0.57
MRPL55-228ENST00000476267 P2RY4P51582 365 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 POLR2HP52434 150 aaKnown RBP11.47□□□□□ -0.57
MRPL55-228ENST00000476267 MAP2K6P52564 334 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 OR2B6P58173 313 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms