RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MYO5CQ9NQX4 1742 aa3.36□□□□□ -1.87
BRCA1-212ENST00000473961 FANCAO15360 1455 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 TRAV9-2A0A087WT02 112 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SMIM28A0A1B0GU29 152 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF840PA6NDX5 716 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 CCDC182A6NF36 153 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 DHRS7CA6NNS2 312 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 LRRIQ3A6PVS8 624 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-212ENST00000473961 PP2D1A8MPX8 630 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 A8MX80 341 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SHISA9B4DS77 424 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 RS1O15537 224 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 EFNA2O43921 213 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SRPX2O60687 465 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SMIM24O75264 130 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 E2F6O75461 281 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 ECI2O75521 394 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 CABYRO75952 493 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 IGHG3P01860 377 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 UMPSP11172 480 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 TOP1P11387 765 aaKnown RBP3.35□□□□□ -1.87
BRCA1-212ENST00000473961 MMP11P24347 488 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 CCNCP24863 283 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 PTBP1P26599 531 aaKnown RBP eCLIP3.35□□□□□ -1.87
BRCA1-212ENST00000473961 UGT1A5P35504 534 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 HMGCLP35914 325 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 CASP4P49662 377 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 PSMD7P51665 324 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SH3BGRP55822 239 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-212ENST00000473961 GNGT1P63211 74 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 OGDHQ02218 1023 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 CD47Q08722 323 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 ASPHQ12797 758 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 XRCC4Q13426 336 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 PPP1R7Q15435 360 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SLC15A2Q16348 729 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 KLHL38Q2WGJ6 581 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 TRIM16LQ309B1 348 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SLC25A52Q3SY17 297 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 TPGS2Q68CL5 300 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF57Q68EA5 555 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-212ENST00000473961 ATL3Q6DD88 541 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 OR5M10Q6IEU7 315 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 Q6ZTC4 211 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 CCDC121Q6ZUS5 278 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 GPRIN3Q6ZVF9 776 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 TIPARPQ7Z3E1 657 aaKnown RBP3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SERINC5Q86VE9 423 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 FAM228AQ86W67 206 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 PAQR7Q86WK9 346 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 HIPK1Q86Z02 1210 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SLC22A9Q8IVM8 553 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 CCDC65Q8IXS2 484 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 KIR3DL3Q8N743 410 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 MFSD9Q8NBP5 474 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 OR9K2Q8NGE7 335 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 OR51G2Q8NGK0 314 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 OR52K2Q8NGK3 314 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 OR5L2Q8NGL0 311 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 OR6T1Q8NGN1 323 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 OR2L2Q8NH16 312 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 CCDC12Q8WUD4 166 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-212ENST00000473961 HTR3CQ8WXA8 447 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 BADQ92934 168 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 TCEANC2Q96MN5 208 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF599Q96NL3 588 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 CLCC1Q96S66 551 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 TM2D1Q9BX74 207 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 UPF3BQ9BZI7 483 aaKnown RBP3.35□□□□□ -1.87
BRCA1-212ENST00000473961 AZI2Q9H6S1 392 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 IL36GQ9NZH8 169 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 ARMCX1Q9P291 453 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 TMCO1Q9UM00 188 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 PRPF19Q9UMS4 504 aaKnown RBP3.35□□□□□ -1.87
BRCA1-212ENST00000473961 C15orf41Q9Y2V0 281 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 L3MBTL1Q9Y468 752 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 TIMM10BQ9Y5J6 103 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 GMEB1Q9Y692 573 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SHPRHQ149N8 1683 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 SYNRGQ9UMZ2 1314 aa3.35□□□□□ -1.87
BRCA1-212ENST00000473961 ADGRB2O60241 1585 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 DNMBPQ6XZF7 1577 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 VPS37CA5D8V6 355 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-212ENST00000473961 ARHGEF35A5YM69 484 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 FAM220BPB1ANY3 271 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 E9PBE3 544 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 FCN1O00602 326 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 GPAA1O43292 621 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF264O43296 627 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 CXCL13O43927 109 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 PRKYO43930 277 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 HCN1O60741 890 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 PFKFB2O60825 505 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 DIRAS1O95057 198 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 SLC2A10O95528 541 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 LALBAP00709 142 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 AGTP01019 485 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 RPSAP08865 295 aaKnown RBP3.34□□□□□ -1.87
BRCA1-212ENST00000473961 LAMP1P11279 417 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 PGAM2P15259 253 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms