RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SLC47A1Q96FL8 570 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 ARL5BQ96KC2 179 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 WFDC6Q9BQY6 131 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 COQ10BQ9H8M1 238 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 MAGEL2Q9UJ55 1249 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 RPS6KA6Q9UK32 745 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 HDGFL3Q9Y3E1 203 aa11.13□□□□□ -0.63
DDX56-209ENST00000473924 KIAA1549Q9HCM3 1950 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 CPSF4LA6NMK7 179 aaKnown RBP11.12□□□□□ -0.63
DDX56-209ENST00000473924 FAM90A27PA6NNH2 459 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 A8MVM7 634 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 TPST2O60704 377 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 AQP8O94778 261 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 ENPP1P22413 925 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 OPRM1P35372 400 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 MSX2P35548 267 aaPredicted RBP11.12□□□□□ -0.63
DDX56-209ENST00000473924 OR1E2P47887 323 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 AGFG1P52594 562 aaKnown RBP11.12□□□□□ -0.63
DDX56-209ENST00000473924 OR2B6P58173 313 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 NPTX1Q15818 432 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 ZNF239Q16600 458 aaKnown RBP11.12□□□□□ -0.63
DDX56-209ENST00000473924 ENTPD8Q5MY95 495 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 GTF2IRD2BQ6EKJ0 949 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 DEF8Q6ZN54 512 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 CBLL1Q75N03 491 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 ATG4DQ86TL0 474 aaPredicted RBP11.12□□□□□ -0.63
DDX56-209ENST00000473924 GTF2IRD2Q86UP8 949 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 ARHGAP24Q8N264 748 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 CNEP1R1Q8N9A8 125 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 OR4D11Q8NGI4 311 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 LILRB4Q8NHJ6 448 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 SRXN1Q9BYN0 137 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 C1orf21Q9H246 121 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 RNF122Q9H9V4 155 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 C12orf10Q9HB07 376 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 TAS2R1Q9NYW7 299 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 ZNF629Q9UEG4 869 aaPredicted RBP11.12□□□□□ -0.63
DDX56-209ENST00000473924 CD300AQ9UGN4 299 aa11.12□□□□□ -0.63
DDX56-209ENST00000473924 NCOA6Q14686 2063 aaPredicted RBP11.12□□□□□ -0.63
DDX56-209ENST00000473924 USP9XQ93008 2570 aaPredicted RBP11.11□□□□□ -0.63
DDX56-209ENST00000473924 IGHV3-15A0A0B4J1V0 119 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 A0A0B4J2E0 115 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 A0A1B0GX12 115 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 ZC3H12DA2A288 527 aaKnown RBP11.11□□□□□ -0.63
DDX56-209ENST00000473924 TRAPPC13A5PLN9 417 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 GYG2O15488 501 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 PMS2P2O95744 297 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 CRHP06850 196 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 IDUAP35475 653 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 CDH12P55289 794 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 SIRPAP78324 504 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 FOXF2Q12947 444 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 CEACAM7Q14002 265 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 CDSNQ15517 529 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 IFI44LQ53G44 452 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 EEF1A1P5Q5VTE0 462 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 C1orf140Q5VVS0 124 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 ZNF613Q6PF04 617 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 FCRLAQ7L513 359 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 VTCN1Q7Z7D3 282 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 STK35Q8TDR2 534 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 ADAMTS16Q8TE57 1224 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 SLC38A4Q969I6 547 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 HSH2DQ96JZ2 352 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 SFXN3Q9BWM7 321 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 TAPBPLQ9BX59 468 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 POTEKPQ9BYX7 375 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 UCK2Q9BZX2 261 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 KCNJ16Q9NPI9 418 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 PRPF19Q9UMS4 504 aaKnown RBP11.11□□□□□ -0.63
DDX56-209ENST00000473924 SAMD4AQ9UPU9 718 aaKnown RBP11.11□□□□□ -0.63
DDX56-209ENST00000473924 TRAPPC4Q9Y296 219 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 SNX13Q9Y5W8 968 aa11.11□□□□□ -0.63
DDX56-209ENST00000473924 A0A087WUJ7 227 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 A0A1W2PNV4 684 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 NKX2-6A6NCS4 301 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 TMEM229AB2RXF0 380 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 EEF1E1-BLOC1S5C9J1V9 151 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 PRSS44E7EML9 344 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 ARPC2O15144 300 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 EEF1E1O43324 174 aaKnown RBP11.1□□□□□ -0.63
DDX56-209ENST00000473924 DNPH1O43598 174 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 CHP2O43745 196 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 PRKD3O94806 890 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 AHSA1O95433 338 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 IL18BPO95998 194 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 IFNW1P05000 195 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 GPIP06744 558 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 IMPDH2P12268 514 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 FPR1P21462 350 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 GTF2E2P29084 291 aaKnown RBP11.1□□□□□ -0.63
DDX56-209ENST00000473924 IFNA8P32881 189 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 CTBP2P56545 445 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 TAS2R41P59536 307 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 SLC35A1P78382 337 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 CBX1P83916 185 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 RNPS1Q15287 305 aaKnown RBP11.1□□□□□ -0.63
DDX56-209ENST00000473924 OR7A5Q15622 319 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 SLC25A35Q3KQZ1 300 aa11.1□□□□□ -0.63
DDX56-209ENST00000473924 DNAL1Q4LDG9 190 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms