RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 OR4A8P0C604 315 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 HNF1AP20823 631 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 CALCRP30988 508 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 SLC17A1Q14916 467 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 SLC46A3Q7Z3Q1 461 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 CARM1Q86X55 608 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 RIMKLAQ8IXN7 391 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 SEMA6DQ8NFY4 1073 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 OR56A1Q8NGH5 318 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 PIGXQ8TBF5 258 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 AGR3Q8TD06 166 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 CCDC126Q96EE4 140 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 SNX18Q96RF0 628 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 TXLNGYQ9BZA5 131 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 CA10Q9NS85 328 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 DCTN4Q9UJW0 460 aa10.96□□□□□ -0.65
TRAF4-209ENST00000473421 TMEM129A0AVI4 362 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 TMEM72A0PK05 275 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 GPR171O14626 319 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 GLRA3O75311 464 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 SHBGP04278 402 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 CELA3BP08861 270 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 BMP4P12644 408 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 PGCP20142 388 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 MATN1P21941 496 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 SRP14P37108 136 aaKnown RBP10.95□□□□□ -0.66
TRAF4-209ENST00000473421 APOBEC1P41238 236 aaKnown RBP10.95□□□□□ -0.66
TRAF4-209ENST00000473421 PRPS1P60891 318 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 HGFACQ04756 655 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 PCLAFQ15004 111 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 TYW3Q6IPR3 259 aaKnown RBP10.95□□□□□ -0.66
TRAF4-209ENST00000473421 RINLQ6ZS11 566 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 RNF165Q6ZSG1 346 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 C6orf120Q7Z4R8 191 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 R3HCC1LQ7Z5L2 792 aaKnown RBP10.95□□□□□ -0.66
TRAF4-209ENST00000473421 DDIASQ8IXT1 998 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 C1orf162Q8NEQ5 155 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-209ENST00000473421 SLC25A43Q8WUT9 341 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-209ENST00000473421 TWIST2Q8WVJ9 160 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 CNOT9Q92600 299 aaKnown RBP10.95□□□□□ -0.66
TRAF4-209ENST00000473421 RAB8BQ92930 207 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 ZNF350Q9GZX5 532 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 PLK3Q9H4B4 646 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 PSMC3IPQ9P2W1 217 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-209ENST00000473421 UPB1Q9UBR1 384 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 AMDHD2Q9Y303 409 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 FKBP7Q9Y680 259 aa10.95□□□□□ -0.66
TRAF4-209ENST00000473421 PKD1L1Q8TDX9 2849 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 ZNF503-AS2A6NEH8 195 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 H3BQF6 201 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 WNT9BO14905 357 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 CFLARO15519 480 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 STX11O75558 287 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 LGI1O95970 557 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 TACSTD2P09758 323 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 OR12D1P0DN82 309 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 NEFHP12036 1026 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 DAOP14920 347 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 GIFP27352 417 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 APEX1P27695 318 aaKnown RBP10.94□□□□□ -0.66
TRAF4-209ENST00000473421 MPGP29372 298 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 SOAT1P35610 550 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 HPCAL1P37235 193 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 MAGEA8P43361 318 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 IDH2P48735 452 aaKnown RBP10.94□□□□□ -0.66
TRAF4-209ENST00000473421 SNRPD2P62316 118 aaKnown RBP10.94□□□□□ -0.66
TRAF4-209ENST00000473421 CKAP4Q07065 602 aaKnown RBP10.94□□□□□ -0.66
TRAF4-209ENST00000473421 CCNIQ14094 377 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 MSMPQ1L6U9 139 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 ARHGAP11BQ3KRB8 267 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 XKR7Q5GH72 579 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 C6orf136Q5SQH8 315 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 IL23RQ5VWK5 629 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 ANKRD16Q6P6B7 361 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 EIF3MQ7L2H7 374 aaKnown RBP10.94□□□□□ -0.66
TRAF4-209ENST00000473421 C17orf78Q8N4C9 275 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 TMEM99Q8N816 258 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 ZNF563Q8TA94 476 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 SFXN5Q8TD22 340 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 TMEM234Q8WY98 164 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 AURKBQ96GD4 344 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-209ENST00000473421 TSPYL1Q9H0U9 437 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 OR51I1Q9H343 314 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 NELFAQ9H3P2 528 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 OCEL1Q9H607 264 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 TMEM181Q9P2C4 612 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 OSGIN1Q9UJX0 560 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 TMED5Q9Y3A6 229 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 HDGFL3Q9Y3E1 203 aa10.94□□□□□ -0.66
TRAF4-209ENST00000473421 A0A096LPE4 126 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 TMED7-TICAM2A0A0A6YYA0 188 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 A0A1W2PPZ6 126 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 SH3PXD2BA1X283 911 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 AKR7A3O95154 331 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 CECR9P0C854 216 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 CRHR1P34998 444 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 THBS4P35443 961 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 CDH15P55291 814 aa10.93□□□□□ -0.66
TRAF4-209ENST00000473421 NAAAQ02083 359 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms