RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 TREX2Q9BQ50 279 aaPredicted RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 PSD2Q9BQI7 771 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 PRSS27Q9BQR3 290 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 RBM4Q9BWF3 364 aaKnown RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 RAB11FIP5Q9BXF6 653 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 GABARAPL3Q9BY60 117 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 GSDMCQ9BYG8 508 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 YTHDF1Q9BYJ9 559 aaKnown RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 MRPS26Q9BYN8 205 aaKnown RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 NLNQ9BYT8 704 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 RTN4RQ9BZR6 473 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 YIPF3Q9GZM5 350 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 VCX3BQ9H321 246 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 DUSP21Q9H596 190 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 UCK1Q9HA47 277 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 NMNAT1Q9HAN9 279 aaPredicted RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 CLK4Q9HAZ1 481 aaKnown RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 BCL2L10Q9HD36 194 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 NECTIN3Q9NQS3 549 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 C8orf4Q9NR00 106 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 SLC22A11Q9NSA0 550 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 ZCCHC3Q9NUD5 404 aaKnown RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 ATAD3AQ9NVI7 634 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 FKBP14Q9NWM8 211 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 LYARQ9NX58 379 aaKnown RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 GIN1Q9NXP7 522 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 GAR1Q9NY12 217 aaKnown RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 FLRT3Q9NZU0 649 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 ERVK-18Q9QC07 812 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 MGAT4CQ9UBM8 478 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 DNAJB11Q9UBS4 358 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 LPAR3Q9UBY5 353 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 MUTYHQ9UIF7 546 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 RPS6KA6Q9UK32 745 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 ITGB1BP2Q9UKP3 347 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 CDC14AQ9UNH5 594 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 C19orf53Q9UNZ5 99 aaPredicted RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 SAMD4AQ9UPU9 718 aaKnown RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 RNF6Q9Y252 685 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 DTX4Q9Y2E6 619 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 SH3GLB1Q9Y371 365 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 SAMHD1Q9Y3Z3 626 aaKnown RBP2.2□□□□□ -2.06
VPS45-206ENST00000472756 SNX8Q9Y5X2 465 aa2.2□□□□□ -2.06
VPS45-206ENST00000472756 MDC1Q14676 2089 aaKnown RBP2.19□□□□□ -2.06
VPS45-206ENST00000472756 FANCMQ8IYD8 2048 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 SCN3AQ9NY46 2000 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 A0A087WV62 115 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 A0A087WXM4 84 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 IGHV1OR21-1A0A087WYE8 117 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 IGKV3D-11A0A0A0MRZ8 115 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 A0A0G2JPF8 293 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 A0A1B0GTQ1 180 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.19□□□□□ -2.06
VPS45-206ENST00000472756 SMIM31A0A1B0GVY4 71 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 A0A1W2PQM1 296 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 SH3PXD2BA1X283 911 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 C17orf51A8MQB3 221 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 HNRNPCL2B2RXH8 293 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 HNRNPCL3B7ZW38 293 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 LMO7DNF2Z398 122 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 NPIPB9F8W1W9 429 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 SLC1A7O00341 560 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 PEX12O00623 359 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 GNGT2O14610 69 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 BCKDKO14874 412 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 ZSCAN9O15535 394 aaPredicted RBP2.19□□□□□ -2.06
VPS45-206ENST00000472756 LRRTM2O43300 516 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 AQP9O43315 295 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 ZNF749O43361 778 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 SPRY2O43597 315 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 ASNA1O43681 348 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 PIP5K1CO60331 668 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 PLOD3O60568 738 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 SRPX2O60687 465 aaPredicted RBP2.19□□□□□ -2.06
VPS45-206ENST00000472756 ZNF354AO60765 605 aaPredicted RBP2.19□□□□□ -2.06
VPS45-206ENST00000472756 GMNNO75496 209 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 UGT2B17O75795 530 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 SEC14L2O76054 403 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 KCNK2O95069 426 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 NKX2-2O95096 273 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 TNFAIP8O95379 198 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 STAMBPO95630 424 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 GPR75O95800 540 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 CLPTM1O96005 669 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 MT-ND2P03891 347 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 ATP1B1P05026 303 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 ANXA2P07355 339 aaKnown RBP2.19□□□□□ -2.06
VPS45-206ENST00000472756 FHP07954 510 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 HNRNPCL4P0DMR1 293 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 SPTBP11277 2137 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 APEHP13798 732 aaKnown RBP2.19□□□□□ -2.06
VPS45-206ENST00000472756 CTSEP14091 401 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 POU2F1P14859 743 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 PORP16435 677 aaPredicted RBP2.19□□□□□ -2.06
VPS45-206ENST00000472756 DDX5P17844 614 aaKnown RBP2.19□□□□□ -2.06
VPS45-206ENST00000472756 CDH2P19022 906 aaPredicted RBP2.19□□□□□ -2.06
VPS45-206ENST00000472756 ITIH1P19827 911 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 NT5EP21589 574 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 CDH3P22223 829 aa2.19□□□□□ -2.06
VPS45-206ENST00000472756 MMP11P24347 488 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms