RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 TMEM181Q9P2C4 612 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 TRAPPC4Q9Y296 219 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 ZNF281Q9Y2X9 895 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 FLVCR1Q9Y5Y0 555 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 ZNF587BE7ETH6 402 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 AKAP10O43572 662 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 CSTAP01040 98 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 SBK3P0C264 359 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 PRKAA2P54646 552 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 GNG11P61952 73 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 SKP2Q13309 424 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 PDZK1Q5T2W1 519 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 EIF3MQ7L2H7 374 aaKnown RBP12.08□□□□□ -0.48
SMURF1-203ENST00000472627 GRINAQ7Z429 371 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 CCDC103Q8IW40 242 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 CKAP2Q8WWK9 683 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 TMEM45BQ96B21 275 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 MTERF3Q96E29 417 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 L3HYPDHQ96EM0 354 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 EGLN2Q96KS0 407 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 PAFAH2Q99487 392 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 DOK1Q99704 481 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 NMUR2Q9GZQ4 415 aa12.08□□□□□ -0.48
SMURF1-203ENST00000472627 A0A0G2JMP0 313 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 A0A0X1KG70 313 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 SH3PXD2BA1X283 911 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 OR6C65A6NJZ3 312 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 TRIM49D1C9J1S8 452 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 NPIPB9F8W1W9 429 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 DNAJA2O60884 412 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 AK1P00568 194 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 UBTFL6P0CB48 400 aaPredicted RBP12.07□□□□□ -0.48
SMURF1-203ENST00000472627 HKR1P10072 659 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 ACHEP22303 614 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 FPR2P25090 351 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 NTF4P34130 210 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 HPCAL1P37235 193 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 RPL3P39023 403 aaKnown RBP12.07□□□□□ -0.48
SMURF1-203ENST00000472627 ASMTP46597 345 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 POU3F1Q03052 451 aaPredicted RBP12.07□□□□□ -0.48
SMURF1-203ENST00000472627 TBRG1Q3YBR2 411 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 SLC9B1Q4ZJI4 515 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 ZNF311Q5JNZ3 666 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 ANKRD16Q6P6B7 361 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 AAED1Q7RTV5 226 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 TMEM151AQ8N4L1 468 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 FAM169BQ8N8A8 192 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 OR4M2Q8NGB6 313 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 CLDND2Q8NHS1 167 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 NANPQ8TBE9 248 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 MOAP1Q96BY2 351 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 DDIT4LQ96D03 193 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 CCDC126Q96EE4 140 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 MS4A5Q9H3V2 200 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 NARFLQ9H6Q4 476 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 C1orf109Q9NX04 203 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 PCDHGB4Q9UN71 923 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 PTGDR2Q9Y5Y4 395 aa12.07□□□□□ -0.48
SMURF1-203ENST00000472627 ARPC4-TTLL3A0A0A6YYG9 625 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 DUXAA6NLW8 204 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 ESPNB1AK53 854 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 SLC28A1O00337 649 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 PIP5K1BO14986 540 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 ADRA2AP08913 450 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 CECR9P0C854 216 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 GAAP10253 952 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 PRPH2P23942 346 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 THBS4P35443 961 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 HTR3AP46098 478 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 CCT3P49368 545 aaKnown RBP12.06□□□□□ -0.48
SMURF1-203ENST00000472627 PDE7AQ13946 482 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 ZNF385BQ569K4 471 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 ZDHHC24Q6UX98 284 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 C1QL2Q7Z5L3 287 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 ZCCHC24Q8N2G6 241 aaKnown RBP12.06□□□□□ -0.48
SMURF1-203ENST00000472627 CCNYL1Q8N7R7 359 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 SPATA4Q8NEY3 305 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 OR1K1Q8NGR3 316 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 OIT3Q8WWZ8 545 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 PMM1Q92871 262 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 TSSK3Q96PN8 268 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 CCDC106Q9BWC9 280 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 ZMAT3Q9HA38 289 aaKnown RBP12.06□□□□□ -0.48
SMURF1-203ENST00000472627 CTPS2Q9NRF8 586 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 CRNNQ9UBG3 495 aaPredicted RBP12.06□□□□□ -0.48
SMURF1-203ENST00000472627 ZNF180Q9UJW8 692 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 SLC35A3Q9Y2D2 325 aa12.06□□□□□ -0.48
SMURF1-203ENST00000472627 LOC105371242A0A075B767 164 aa12.05□□□□□ -0.48
SMURF1-203ENST00000472627 J3QLI3 93 aa12.05□□□□□ -0.48
SMURF1-203ENST00000472627 M0R233 179 aa12.05□□□□□ -0.48
SMURF1-203ENST00000472627 STX11O75558 287 aa12.05□□□□□ -0.48
SMURF1-203ENST00000472627 URI1O94763 535 aaPredicted RBP12.05□□□□□ -0.48
SMURF1-203ENST00000472627 SNRPAP09012 282 aaKnown RBP12.05□□□□□ -0.48
SMURF1-203ENST00000472627 NEFHP12036 1026 aa12.05□□□□□ -0.48
SMURF1-203ENST00000472627 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
SMURF1-203ENST00000472627 MAP2K6P52564 334 aa12.05□□□□□ -0.48
SMURF1-203ENST00000472627 FOXA1P55317 472 aa12.05□□□□□ -0.48
SMURF1-203ENST00000472627 SH3BGRP55822 239 aaPredicted RBP12.05□□□□□ -0.48
SMURF1-203ENST00000472627 TMEM33P57088 247 aa12.05□□□□□ -0.48
SMURF1-203ENST00000472627 UBA52P62987 128 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms