RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 KLF11O14901 512 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 CD3EP07766 207 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 KRT16P08779 473 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 PABPC4LP0CB38 370 aaKnown RBP7.1□□□□□ -1.27
USP48-207ENST00000471752 ETFAP13804 333 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 PGCP20142 388 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 COX5AP20674 150 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 TACR3P29371 465 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 S100A3P33764 101 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 CHI3L1P36222 383 aaPredicted RBP7.1□□□□□ -1.27
USP48-207ENST00000471752 P2RY4P51582 365 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 IRX1P78414 480 aaPredicted RBP7.1□□□□□ -1.27
USP48-207ENST00000471752 H3F3AP84243 136 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 MAD2L1Q13257 205 aaPredicted RBP7.1□□□□□ -1.27
USP48-207ENST00000471752 PPA1Q15181 289 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 GABRA6Q16445 453 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 SMU1Q2TAY7 513 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 TSPO2Q5TGU0 170 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 ZNF836Q6ZNA1 936 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 DNM1P46Q6ZS02 220 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 LINGO2Q7L985 606 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 CNPY4Q8N129 248 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 SLC43A2Q8N370 569 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 KDM8Q8N371 416 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 NATD1Q8N6N6 113 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 TMEM99Q8N816 258 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 ZNF563Q8TA94 476 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 ST8SIA1Q92185 356 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 ZNF385AQ96PM9 386 aaKnown RBP7.1□□□□□ -1.27
USP48-207ENST00000471752 OR52E6Q96RD3 313 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 TACO1Q9BSH4 297 aaKnown RBP7.1□□□□□ -1.27
USP48-207ENST00000471752 BDH2Q9BUT1 245 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 TRAF4Q9BUZ4 470 aaPredicted RBP7.1□□□□□ -1.27
USP48-207ENST00000471752 HDHD5Q9BXW7 423 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 REG4Q9BYZ8 158 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 ADAM19Q9H013 955 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 SEC61A2Q9H9S3 476 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 SSU72Q9NP77 194 aaKnown RBP7.1□□□□□ -1.27
USP48-207ENST00000471752 SLC7A10Q9NS82 523 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 EXD2Q9NVH0 621 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 CISD1Q9NZ45 108 aaKnown RBP7.1□□□□□ -1.27
USP48-207ENST00000471752 SLAMF8Q9P0V8 285 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 KLHL9Q9P2J3 617 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 SEC14L4Q9UDX3 406 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 CHRNA9Q9UGM1 479 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 BTNL2Q9UIR0 455 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 TMED7Q9Y3B3 224 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 SLC25A15Q9Y619 301 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 IGHV4-30-2A0A087WSY4 118 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 A0A096LNT2 108 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 TMEM120BA0PK00 339 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 OR5H1A6NKK0 313 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 GJE1A6NN92 205 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 E9PBE3 544 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 NR5A2O00482 541 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 AKR7A3O95154 331 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 PGRP06401 933 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 TFPTP0C1Z6 253 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 GGT1P19440 569 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 RPS4Y1P22090 263 aaKnown RBP7.09□□□□□ -1.27
USP48-207ENST00000471752 APOBEC1P41238 236 aaKnown RBP7.09□□□□□ -1.27
USP48-207ENST00000471752 KHKP50053 298 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 MAGOHP61326 146 aaKnown RBP7.09□□□□□ -1.27
USP48-207ENST00000471752 RPS4XP62701 263 aaKnown RBP7.09□□□□□ -1.27
USP48-207ENST00000471752 TUBA1BP68363 451 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 TUBA4AP68366 448 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 EPS8Q12929 822 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 CEACAM7Q14002 265 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 HIKESHIQ53FT3 197 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 MRPL2Q5T653 305 aaKnown RBP7.09□□□□□ -1.27
USP48-207ENST00000471752 ANXA8L1Q5VT79 327 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 HHATQ5VTY9 493 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 FBXW9Q5XUX1 488 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 NXNQ6DKJ4 435 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 OGFOD2Q6N063 350 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 C3orf33Q6P1S2 294 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 TUBA1AQ71U36 451 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 MSRB3Q8IXL7 192 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 UBE2J2Q8N2K1 259 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 ARFGAP2Q8N6H7 521 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 NANOS1Q8WY41 292 aaKnown RBP7.09□□□□□ -1.27
USP48-207ENST00000471752 MAL2Q969L2 176 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 FBXW5Q969U6 566 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 ARL8AQ96BM9 186 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 TRNT1Q96Q11 434 aaKnown RBP7.09□□□□□ -1.27
USP48-207ENST00000471752 PANX1Q96RD7 426 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 OR10A4Q9H209 315 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 MTHFD2LQ9H903 347 aaPredicted RBP7.09□□□□□ -1.27
USP48-207ENST00000471752 GP6Q9HCN6 339 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.09□□□□□ -1.27
USP48-207ENST00000471752 PCDHGB4Q9UN71 923 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 NOSIPQ9Y314 301 aaKnown RBP7.09□□□□□ -1.27
USP48-207ENST00000471752 FLVCR1Q9Y5Y0 555 aa7.09□□□□□ -1.27
USP48-207ENST00000471752 LIPT2A6NK58 231 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 CCT8L1PA6NM43 557 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 M0R1B8 84 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 TM9SF1O15321 606 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 SSX4O60224 188 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 PMS2P2O95744 297 aa7.08□□□□□ -1.28
USP48-207ENST00000471752 AK1P00568 194 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms