RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 FAAH2Q6GMR7 532 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 RPL22L1Q6P5R6 122 aaKnown RBP9.75□□□□□ -0.85
APLF-204ENST00000471727 ARL9Q6T311 187 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 NCCRP1Q6ZVX7 275 aaPredicted RBP9.75□□□□□ -0.85
APLF-204ENST00000471727 TRILQ7L0X0 811 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 KCTD20Q7Z5Y7 419 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 OR14A16Q8NHC5 309 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 SENP5Q96HI0 755 aaPredicted RBP9.75□□□□□ -0.85
APLF-204ENST00000471727 CMTM3Q96MX0 182 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 FRMD6Q96NE9 622 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 TGM7Q96PF1 710 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 TBX5Q99593 518 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 NRIP3Q9NQ35 241 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 INIPQ9NRY2 104 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 CYSLTR2Q9NS75 346 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 CUTCQ9NTM9 273 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 RBFOX1Q9NWB1 397 aaKnown RBP9.75□□□□□ -0.85
APLF-204ENST00000471727 IER3IP1Q9Y5U9 82 aa9.75□□□□□ -0.85
APLF-204ENST00000471727 FRG2CA6NGY1 282 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ELOA3DA6NLF2 546 aaPredicted RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 FAM25AB3EWG3 89 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 FAM25CB3EWG5 89 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 FAM25GB3EWG6 89 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 HRKO00198 91 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ADAM11O75078 769 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 UBL4AP11441 157 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 IL9P15248 144 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 HIST1H1CP16403 213 aaKnown RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 MAOAP21397 527 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 HLA-DMAP28067 261 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 RBMS1P29558 406 aaKnown RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 MAP2K3P46734 347 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ARL4DP49703 201 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 SLC25A1P53007 311 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 CAV3P56539 151 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 SLC37A1P57057 533 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 NXPH1P58417 271 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 RPS4XP62701 263 aaKnown RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 COL9A2Q14055 689 aaPredicted RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 ERV3-1Q14264 604 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 TAB1Q15750 504 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 KCNJ8Q15842 424 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ELOA3BQ3SY89 546 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ACSM3Q53FZ2 586 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 EMC4Q5J8M3 183 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 FNDC7Q5VTL7 733 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 PLET1Q6UQ28 207 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 BAIAP2L2Q6UXY1 529 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 B3GLCTQ6Y288 498 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 CEACAM19Q7Z692 300 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 PLXDC1Q8IUK5 500 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 TMEM151BQ8IW70 566 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 SHISA5Q8N114 240 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ELOA3Q8NG57 546 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 OR4C3Q8NH37 302 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 RLN3Q8WXF3 142 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 SHDQ96IW2 340 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 LCORQ96JN0 433 aaPredicted RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 DCLRE1CQ96SD1 692 aaKnown RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 PHOX2BQ99453 314 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 GAS2L1Q99501 681 aaPredicted RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 MNTQ99583 582 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 KCNJ15Q99712 375 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 CTRCQ99895 268 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 TPSD1Q9BZJ3 242 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 NMNAT2Q9BZQ4 307 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 LAT2Q9GZY6 243 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 C11orf54Q9H0W9 315 aaPredicted RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 RNF121Q9H920 327 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 LANCL2Q9NS86 450 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ABRACLQ9P1F3 81 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 DTX4Q9Y2E6 619 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 SIRT4Q9Y6E7 314 aaPredicted RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 CACNA1IQ9P0X4 2223 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 TMEM265A0A087WTH1 108 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ARPC4-TTLL3A0A0A6YYG9 625 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 IGHV5-51A0A0C4DH38 117 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 A0A1B0GTQ1 180 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 SHISA3A0PJX4 238 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ZC3H12DA2A288 527 aaKnown RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 PLA2G10O15496 165 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ZNF264O43296 627 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 LRRTM2O43300 516 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 CDC123O75794 336 aaPredicted RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 GLCEO94923 617 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 CLPSP04118 112 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 NPR2P20594 1047 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 APEX1P27695 318 aaKnown RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 SHC1P29353 583 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 OR12D2P58182 307 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 SIRPAP78324 504 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 HSD11B2P80365 405 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 SLC3A1Q07837 685 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 ELAVL1Q15717 326 aaKnown RBP9.74□□□□□ -0.85
APLF-204ENST00000471727 NDUFA5Q16718 116 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 IDNKQ5T6J7 187 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 SLC6A19Q695T7 634 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 PYHIN1Q6K0P9 492 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 SPATC1Q76KD6 591 aa9.74□□□□□ -0.85
APLF-204ENST00000471727 OVCH1Q7RTY7 1134 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms