RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ZDHHC6Q9H6R6 413 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 AKIRIN1Q9H9L7 192 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 ROPN1Q9HAT0 212 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 PRSS16Q9NQE7 514 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 CHRAC1Q9NRG0 131 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 NINJ2Q9NZG7 142 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 FETUBQ9UGM5 382 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 SCML1Q9UN30 329 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 MRPS18CQ9Y3D5 142 aaKnown RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 UNC80Q8N2C7 3258 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 SPTBN5Q9NRC6 3674 aaKnown RBP4.24□□□□□ -1.73
CCDC39-202ENST00000471307 COL4A2P08572 1712 aa4.24□□□□□ -1.73
CCDC39-202ENST00000471307 COL6A3P12111 3177 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 RGSL1A5PLK6 1076 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 TRIM64CA6NLI5 447 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 ARHGEF33A8MVX0 844 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 KPNA3O00505 521 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-202ENST00000471307 SLC30A4O14863 429 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 BANF1O75531 89 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 KLF8O95600 359 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-202ENST00000471307 IL1BP01584 269 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 UGT2B4P06133 528 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 IVLP07476 585 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 CTSLP07711 333 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 FAM58BPP0C7Q3 252 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 HLA-EP13747 358 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 ZNF30P17039 623 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 AZGP1P25311 298 aaKnown RBP4.23□□□□□ -1.73
CCDC39-202ENST00000471307 SSTR1P30872 391 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 HMGCLP35914 325 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 ATP4BP51164 291 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 CLDN17P56750 224 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 HSD17B7P56937 341 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 GPX6P59796 221 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 SRPXP78539 464 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 CRADDP78560 199 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 ACVR1Q04771 509 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 MZT1Q08AG7 82 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 IFFO1Q0D2I5 559 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 C17orf67Q0P5P2 114 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 ELP6Q0PNE2 266 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 NAB1Q13506 487 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 POU6F1Q14863 301 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 UAP1Q16222 522 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-202ENST00000471307 INAQ16352 499 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 KLHL38Q2WGJ6 581 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 FAM174BQ3ZCQ3 159 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 ZNF776Q68DI1 518 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-202ENST00000471307 PDPK2PQ6A1A2 396 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 KCTD9Q7L273 389 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 GLT6D1Q7Z4J2 308 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 MMAAQ8IVH4 418 aaKnown RBP4.23□□□□□ -1.73
CCDC39-202ENST00000471307 CCDC63Q8NA47 563 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 OR9Q2Q8NGE9 314 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 OR2T3Q8NH03 318 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 TYMSOSQ8TAI1 123 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 DTX3LQ8TDB6 740 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 BLOC1S5Q8TDH9 187 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 CDKL2Q92772 493 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 CFAP36Q96G28 342 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 GTPBP2Q9BX10 602 aaKnown RBP4.23□□□□□ -1.73
CCDC39-202ENST00000471307 FN3KQ9H479 309 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 VPS37BQ9H9H4 285 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 LMAN1LQ9HAT1 526 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 DYRK4Q9NR20 520 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 TREX1Q9NSU2 369 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 NLE1Q9NVX2 485 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-202ENST00000471307 ACTR3BQ9P1U1 418 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 FBXW2Q9UKT8 454 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 MMP17Q9ULZ9 603 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 NDRG2Q9UN36 371 aaKnown RBP4.23□□□□□ -1.73
CCDC39-202ENST00000471307 CHMP2BQ9UQN3 213 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.23□□□□□ -1.73
CCDC39-202ENST00000471307 GON4LQ3T8J9 2241 aa4.23□□□□□ -1.73
CCDC39-202ENST00000471307 MUC22E2RYF6 1773 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-202ENST00000471307 BDP1A6H8Y1 2624 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 C1orf232A0A0U1RR37 186 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 C13orf42A0A1B0GVH6 325 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 EXOC1LA0A1B0GW35 172 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 TCRBV9S1A1TA0A576 114 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 GOLGA6L10A6NI86 522 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 FAM159BA6NKW6 160 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 A8MVM7 634 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 PSMD11O00231 422 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 RASGRF2O14827 1237 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 PFDN6O15212 129 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 STX7O15400 261 aaKnown RBP4.22□□□□□ -1.73
CCDC39-202ENST00000471307 CDH16O75309 829 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 BCAS2O75934 225 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-202ENST00000471307 VAPBO95292 243 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 RPLP0P05388 317 aaKnown RBP4.22□□□□□ -1.73
CCDC39-202ENST00000471307 HEXBP07686 556 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 ALPIP09923 528 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 PIRTP0C851 137 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 DUX4L4P0CJ87 422 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 ADRB3P13945 408 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 ADRA2CP18825 462 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 GIFP27352 417 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 MAGEA9P43362 315 aa4.22□□□□□ -1.73
CCDC39-202ENST00000471307 RPS9P46781 194 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms