RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 GSDMCQ9BYG8 508 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 ROGDIQ9GZN7 287 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 NAT10Q9H0A0 1025 aaKnown RBP0.7□□□□□ -2.3
UBXN4-207ENST00000471246 ALDH8A1Q9H2A2 487 aaPredicted RBP0.7□□□□□ -2.3
UBXN4-207ENST00000471246 RHOJQ9H4E5 214 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 VCPKMTQ9H867 229 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF430Q9H8G1 570 aaPredicted RBP0.7□□□□□ -2.3
UBXN4-207ENST00000471246 SIRT7Q9NRC8 400 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 AGPAT5Q9NUQ2 364 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 SLC25A37Q9NYZ2 338 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 MTRRQ9UBK8 725 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 IL19Q9UHD0 177 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 ALG6Q9Y672 507 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 V9GY05 133 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 PDS5BQ9NTI5 1447 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 SHROOM3Q8TF72 1996 aa0.7□□□□□ -2.3
UBXN4-207ENST00000471246 MROH7-TTC4A0A0A0MT08 1334 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 UBE4BO95155 1302 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 CACNA1GO43497 2377 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 FBN1P35555 2871 aaKnown RBP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 FRMPD3Q5JV73 1810 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 BRWD3Q6RI45 1802 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 TUBGCP6Q96RT7 1819 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 IGLV2-18A0A075B6J9 118 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 IGKV1D-8A0A087WSZ0 117 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 IGHV2-70DA0A0C4DH43 119 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 A0A0G2JN53 185 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 A0A0U1RQV5 110 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 PCNX2A6NKB5 2137 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 IDSB3KWA1 339 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 E7ESA3 106 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 G3V4G9 280 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 AGPAT2O15120 278 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 B4GALT5O43286 388 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 ANGPTL7O43827 346 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 CD5LO43866 347 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 SUPT3HO75486 399 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 RBBP9O75884 186 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 B3GAT3O94766 335 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 CTDNEP1O95476 244 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 MT-ATP6P00846 226 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 TGFAP01135 160 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 DCNP07585 359 aaKnown RBP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 TSPY4P0CV99 314 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 TSPY10P0CW01 314 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 HLA-DPA1P20036 260 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 TBXA2RP21731 343 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 CXCR2P25025 360 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 FGF9P31371 208 aaPredicted RBP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 CXCL5P42830 114 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 PTGFRP43088 359 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 VDAC2P45880 294 aaPredicted RBP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 NAPAP54920 295 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 DLX1P56177 255 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 EWSR1Q01844 656 aaKnown RBP eCLIP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 ENPEPQ07075 957 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 SNTB2Q13425 540 aaKnown RBP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 RIPK1Q13546 671 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 GRB7Q14451 532 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 SF3A2Q15428 464 aaKnown RBP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 NSUN5P1Q3KNT7 163 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 PARP10Q53GL7 1025 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 LRRC10Q5BKY1 277 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 TMEM255AQ5JRV8 349 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 C1QTNF12Q5T7M4 302 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 TMIGD1Q6UXZ0 262 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 SYT10Q6XYQ8 523 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 DPY19L4Q7Z388 723 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 ERASQ7Z444 233 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 LHFPL4Q7Z7J7 247 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 TPRA1Q86W33 373 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 CBWD2Q8IUF1 395 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 PCP2Q8IVA1 136 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 MISPQ8IVT2 679 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 MYOCDQ8IZQ8 938 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 KDM8Q8N371 416 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 OR10G3Q8NGC4 313 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 PNPT1Q8TCS8 783 aaKnown RBP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 GIPC3Q8TF64 312 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 TCTEX1D2Q8WW35 142 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 ST8SIA1Q92185 356 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 FCRL1Q96LA6 429 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 CCNL2Q96S94 520 aaPredicted RBP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 SLC6A7Q99884 636 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 P2RY13Q9BPV8 354 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 NAT9Q9BTE0 207 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 SELENOIQ9C0D9 397 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 C20orf85Q9H1P6 137 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 THAP9Q9H5L6 903 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 DHX33Q9H6R0 707 aaKnown RBP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 NUDT15Q9NV35 164 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF226Q9NYT6 803 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 SPASTQ9UBP0 616 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 MARCOQ9UEW3 520 aaPredicted RBP0.69□□□□□ -2.3
UBXN4-207ENST00000471246 B9D1Q9UPM9 204 aa0.69□□□□□ -2.3
UBXN4-207ENST00000471246 SH3TC1Q8TE82 1336 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ANKRD12Q6UB98 2062 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF407Q9C0G0 2248 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF233A6NK53 670 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 SDHDO14521 159 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms