RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ALG10BQ5I7T1 473 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 CDH24Q86UP0 819 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 SIAH3Q8IW03 269 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 TOMM5Q8N4H5 51 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 LRRC17Q8N6Y2 441 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 OR52E2Q8NGJ4 325 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 OR10G6Q8NH81 332 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 OR14A16Q8NHC5 309 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 HGDQ93099 445 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 ERMAPQ96PL5 475 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 CNN2Q99439 309 aaKnown RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 RPP25Q9BUL9 199 aaKnown RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 IRF2BPLQ9H1B7 796 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 RANBP3Q9H6Z4 567 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 KLHL1Q9NR64 748 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 SLC23A1Q9UHI7 598 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 FANCMQ8IYD8 2048 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 CHD9Q3L8U1 2897 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 TEX13CA0A0J9YWL9 993 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 TMEM127O75204 238 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 RASGRP1O95267 797 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 CD3GP09693 182 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 SNRPBP14678 240 aaKnown RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 PVRP15151 417 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 TYRP1P17643 537 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 CRYZQ08257 329 aaKnown RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 FGFBP1Q14512 234 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 ISXQ2M1V0 245 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 ALG11Q2TAA5 492 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 FBXO46Q6PJ61 603 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 KRT74Q7RTS7 529 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 OR51Q1Q8NH59 317 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 ZMYND19Q96E35 227 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 OR51J1Q9H342 316 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 DIABLOQ9NR28 239 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 B3GNT2Q9NY97 397 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 ELF5Q9UKW6 265 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 ING4Q9UNL4 249 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 TRAV6A0A075B6T7 132 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 A0A0J9YY10 115 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 GRXCR1A8MXD5 290 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 LRRN3E7EW58 273 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 ARPC3O15145 178 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 ANXA3P12429 323 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 HOXB2P14652 356 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 DIO1P49895 249 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 HCCSP53701 268 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 P2RX3P56373 397 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 SRP54P61011 504 aaKnown RBP12.54□□□□□ -0.4
BRCA1-209ENST00000470026 GSG1Q2KHT4 349 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 SLC35D3Q5M8T2 416 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 ULK3Q6PHR2 472 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 BTN2A1Q7KYR7 527 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 ZNF550Q7Z398 422 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 SLC35F2Q8IXU6 374 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 ARL14Q8N4G2 192 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 CSNK1A1LQ8N752 337 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 SDR9C7Q8NEX9 313 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 OR4K13Q8NH42 304 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 SMIM4Q8WVI0 70 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 NMNAT2Q9BZQ4 307 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 LRRN3Q9H3W5 708 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 PLEKHA1Q9HB21 404 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 NRIP3Q9NQ35 241 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 POT1Q9NUX5 634 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 STMN3Q9NZ72 180 aa12.54□□□□□ -0.4
BRCA1-209ENST00000470026 GPRIN2O60269 458 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 HNRNPA2B1P22626 353 aaKnown RBP12.53□□□□□ -0.4
BRCA1-209ENST00000470026 GIFP27352 417 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 OR3A3P47888 321 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 UBE2IP63279 158 aaKnown RBP12.53□□□□□ -0.4
BRCA1-209ENST00000470026 ZBTB37Q5TC79 503 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 SLC22A10Q63ZE4 541 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 KIRREL2Q6UWL6 708 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 DPY19L2P2Q6ZN68 376 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 FAM98AQ8NCA5 519 aaKnown RBP12.53□□□□□ -0.4
BRCA1-209ENST00000470026 NPEPL1Q8NDH3 523 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 VSTM2LQ96N03 204 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-209ENST00000470026 CACNG6Q9BXT2 260 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 MTIF3Q9H2K0 278 aaKnown RBP12.53□□□□□ -0.4
BRCA1-209ENST00000470026 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 ARHGEF17Q96PE2 2063 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-209ENST00000470026 A0A087WUJ7 227 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 A0A0B4J203 849 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 C10orf142B7Z368 130 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 MCIDASD6RGH6 385 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 SULT1A3P0DMM9 295 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 SULT1A4P0DMN0 295 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 GPR143P51810 404 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 HSF2Q03933 536 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 IL10RAQ13651 578 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 SEZ6L2Q6UXD5 910 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 UBE2Q1Q7Z7E8 422 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 SYT9Q86SS6 491 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 ZNRF4Q8WWF5 429 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-209ENST00000470026 SGTBQ96EQ0 304 aa12.53□□□□□ -0.4
BRCA1-209ENST00000470026 SIPA1Q96FS4 1042 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms