RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 TINAGQ9UJW2 476 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 PACSIN3Q9UKS6 424 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 FREM3P0C091 2139 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 PCNX3Q9H6A9 2034 aa11.35□□□□□ -0.59
SPTLC1-204ENST00000469778 A0A0J9YW62 118 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 MBD3L4A6NDZ8 208 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 MBD3L3A6NE82 208 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 MBD3L5A6NJ08 208 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 SLC22A20A6NK97 555 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 CLCA1A8K7I4 914 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 SHISA8B8ZZ34 492 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 SULT2B1O00204 365 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 LRRTM2O43300 516 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 SEC14L5O43304 696 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 NPIPB7O75200 414 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 PDE5AO76074 875 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 RCBTB2O95199 551 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 GPIP06744 558 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 IL11P20809 199 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 SFTPDP35247 375 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 MSX2P35548 267 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 EIF1AXP47813 144 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 OR1E2P47887 323 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 MS4A2Q01362 244 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 CHRNB3Q05901 458 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 MYBPHQ13203 477 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 GK3PQ14409 553 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 RNPS1Q15287 305 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 NPTX1Q15818 432 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 RIPPLY2Q5TAB7 128 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 C1QL3Q5VWW1 255 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 XKRXQ6PP77 449 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 VTCN1Q7Z7D3 282 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 RNF113BQ8IZP6 322 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 OR4D11Q8NGI4 311 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 MFSD8Q8NHS3 518 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 MBD3L2Q8NHZ7 208 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 ASB5Q8WWX0 329 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 SMPDL3BQ92485 455 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 RND1Q92730 232 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 SLC41A3Q96GZ6 507 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 OR5B2Q96R09 309 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 NPAS1Q99742 590 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 NAA11Q9BSU3 229 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 ZNF426Q9BUY5 554 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 TAPBPLQ9BX59 468 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 AMBRA1Q9C0C7 1298 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 KLHL4Q9C0H6 718 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 YY1AP1Q9H869 796 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 COQ3Q9NZJ6 369 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 TNFRSF10DQ9UBN6 386 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 ZNF629Q9UEG4 869 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 ERRFI1Q9UJM3 462 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 POMPQ9Y244 141 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 FAM215AQ9Y5M1 114 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 NCKAP5O14513 1909 aa11.34□□□□□ -0.59
SPTLC1-204ENST00000469778 TRAV36DV7A0A075B6V5 113 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 TMEM72A0PK05 275 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 CPSF4LA6NMK7 179 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 TNFSF11O14788 317 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 KRT36O76013 467 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 VAMP5O95183 116 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 AHSA1O95433 338 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 IL18BPO95998 194 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 GLI4P10075 376 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 CEACAM8P31997 349 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 IDUAP35475 653 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 UQCRFS1P47985 274 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 DIO1P49895 249 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 PIN1Q13526 163 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 FLOT2Q14254 428 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 TRAM2Q15035 370 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 PDK3Q15120 406 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 C1orf140Q5VVS0 124 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 RTL6Q6ICC9 239 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 TTC33Q6PID6 262 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 POMZP3Q6PJE2 187 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 DEF8Q6ZN54 512 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 RBM45Q8IUH3 476 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 OFCC1Q8IZS5 231 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 FAM26EQ8N5C1 309 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 ATP6V1C2Q8NEY4 427 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 CCDC124Q96CT7 223 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 CLPTM1LQ96KA5 538 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 C7orf34Q96L11 122 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 ZNF300Q96RE9 604 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 TRIB1Q96RU8 372 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 PIP5K1AQ99755 562 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 WFDC6Q9BQY6 131 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 PRRG4Q9BZD6 226 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 TMEM185BQ9H7F4 350 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 NDUFAF4Q9P032 175 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 CLCF1Q9UBD9 225 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 SLC7A8Q9UHI5 535 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 A4GNTQ9UNA3 340 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 CORINQ9Y5Q5 1042 aa11.33□□□□□ -0.6
SPTLC1-204ENST00000469778 A0A1W2PRQ8 180 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 CLEC18AA5D8T8 446 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 WIPF3A6NGB9 483 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 CXCL13O43927 109 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms