RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 UBE2E3Q969T4 207 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 EME1Q96AY2 570 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 C3orf49Q96BT1 292 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 MTBPQ96DY7 904 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 CCDC42Q96M95 316 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 TSNARE1Q96NA8 513 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 PKP2Q99959 881 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 MAPKAP1Q9BPZ7 522 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 LRRC1Q9BTT6 524 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 EFCAB11Q9BUY7 163 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 ELOVL1Q9BW60 279 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 HSD3B7Q9H2F3 369 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 MMP27Q9H306 513 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 FKRPQ9H9S5 495 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 MYNNQ9NPC7 610 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 SDHAF3Q9NRP4 125 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 DDX28Q9NUL7 540 aaKnown RBP4.08□□□□□ -1.76
VPS8-219ENST00000469479 PAK5Q9P286 719 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 GALPQ9UBC7 116 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 HYOU1Q9Y4L1 999 aa4.08□□□□□ -1.76
VPS8-219ENST00000469479 MALRD1Q5VYJ5 2156 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 A0A1B0GUS0 222 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 MAGEB16A2A368 324 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 DPPA5A6NC42 116 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 GAGE12JA6NER3 117 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 SCAMP2O15127 329 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 SEC14L5O43304 696 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 ZIC3O60481 467 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 GCM2O75603 506 aaPredicted RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 BCL10O95999 233 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 TPM3P06753 285 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 TPM1P09493 284 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 KITP10721 976 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 DDX5P17844 614 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 TPSB2P20231 275 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 CD22P20273 847 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 NMBRP28336 390 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 HOXD3P31249 432 aaPredicted RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 CLDN15P56746 228 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 RAE1P78406 368 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 CDKL1Q00532 357 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 HMGCS1Q01581 520 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 TNFRSF17Q02223 184 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 SLMAPQ14BN4 828 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 TPSAB1Q15661 275 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 HIST2H2ACQ16777 129 aaPredicted RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 ZSWIM7Q19AV6 140 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 ASTE1Q2TB18 679 aaPredicted RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 CTU2Q2VPK5 515 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 ZNF718Q3SXZ3 478 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 GLE1Q53GS7 698 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 HIST2H2AA3Q6FI13 130 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 SLC22A25Q6T423 547 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 RAD9BQ6WBX8 426 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 RBMS3Q6XE24 437 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 TMEM64Q6YI46 380 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 MBOAT1Q6ZNC8 495 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 Q6ZT83 130 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 GPR180Q86V85 440 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 ZCCHC7Q8N3Z6 543 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 BPIFB2Q8N4F0 458 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 CCDC89Q8N998 374 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 RDH11Q8TC12 318 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 EEF1AKMT1Q8WVE0 214 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 HGDQ93099 445 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 ADIPOR1Q96A54 375 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 PPWD1Q96BP3 646 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 OMA1Q96E52 524 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 REXO5Q96IC2 774 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 FOXN4Q96NZ1 517 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 COL21A1Q96P44 957 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 BPIFA3Q9BQP9 254 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 INPP5KQ9BT40 448 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 FAM167BQ9BTA0 163 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 AICDAQ9GZX7 198 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 SPNS1Q9H2V7 528 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 GOLPH3Q9H4A6 298 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 CNOT10Q9H9A5 744 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 CXorf21Q9HAI6 301 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 ZBTB26Q9HCK0 441 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 TIGARQ9NQ88 270 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 ABHD10Q9NUJ1 306 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 LYARQ9NX58 379 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 DNAJB11Q9UBS4 358 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 UTS2RQ9UKP6 389 aa4.07□□□□□ -1.76
VPS8-219ENST00000469479 KMT2CQ8NEZ4 4911 aaKnown RBP4.07□□□□□ -1.76
VPS8-219ENST00000469479 MED12Q93074 2177 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 MED12LQ86YW9 2145 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 HEATR5AQ86XA9 2040 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 NCKAP5O14513 1909 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 E7EQL1 145 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 J3QLI3 93 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 TIMM23O14925 209 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 CLGNO14967 610 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 TO15178 435 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 PIN1P1O15428 100 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 RAMP1O60894 148 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 SHOX2O60902 331 aaPredicted RBP4.06□□□□□ -1.76
VPS8-219ENST00000469479 KERAO60938 352 aa4.06□□□□□ -1.76
VPS8-219ENST00000469479 KRT36O76013 467 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms