RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 IL21RQ9HBE5 538 aa9.24□□□□□ -0.93
NUP50-214ENST00000469163 B3GAT2Q9NPZ5 323 aa9.24□□□□□ -0.93
NUP50-214ENST00000469163 MAGEL2Q9UJ55 1249 aa9.24□□□□□ -0.93
NUP50-214ENST00000469163 PCDHA9Q9Y5H5 950 aa9.24□□□□□ -0.93
NUP50-214ENST00000469163 EREGO14944 169 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 TCF21O43680 179 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 NCR1O76036 304 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 ANXA2P07355 339 aaKnown RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 HIST1H1BP16401 226 aaKnown RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 TAGLN2P37802 199 aaKnown RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 CDC34P49427 236 aaPredicted RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 RAB8AP61006 207 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 ST3GAL4Q11206 333 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 TMEM151AQ8N4L1 468 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 OR8J2Q8NGG1 315 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 OR10D4PQ8NGN7 298 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 GTPBP3Q969Y2 492 aaKnown RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 MRGPRX1Q96LB2 322 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 ALG8Q9BVK2 526 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 POLDIP3Q9BY77 421 aaKnown RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 TCEAL2Q9H3H9 227 aaPredicted RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 SLAMF8Q9P0V8 285 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 TMEFF2Q9UIK5 374 aaPredicted RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 GPR34Q9UPC5 381 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 PCYT1BQ9Y5K3 369 aaPredicted RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 AP4M1O00189 453 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 GMFGO60234 142 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 TFP02787 698 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 ANKRD34CP0C6C1 535 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 TBXA2RP21731 343 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 SDHAP31040 664 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 SOX3P41225 446 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 MTPNP58546 118 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 GPR176Q14439 515 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 SLBPQ14493 270 aaKnown RBP eCLIP9.23□□□□□ -0.93
NUP50-214ENST00000469163 HLXQ14774 488 aaPredicted RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 TECRLQ5HYJ1 363 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 FAM69AQ5T7M9 428 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 GPR153Q6NV75 609 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 C11orf88Q6PI97 169 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 ZC3H14Q6PJT7 736 aaKnown RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 PXKQ7Z7A4 578 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 THOC3Q96J01 351 aaKnown RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 LMLNQ96KR4 655 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 NLNQ9BYT8 704 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 SGK2Q9HBY8 427 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 ING1Q9UK53 422 aaPredicted RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 SLCO1B1Q9Y6L6 691 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 FXYD6-FXYD2A0A087WZ82 144 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 ZNF705EA8MWA4 302 aaPredicted RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 NPIPA7E9PJI5 369 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 SMAD9O15198 467 aaKnown RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 CBR3O75828 277 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 NXPH2O95156 264 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 FARS2O95363 451 aaKnown RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 NPIPA8P0DM63 369 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 PVRP15151 417 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 FCARP24071 287 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 S100A11P31949 105 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 SELENOPP49908 381 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.23□□□□□ -0.93
NUP50-214ENST00000469163 NTRK2Q16620 822 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 DEFB133Q30KQ1 61 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 MEX3BQ6ZN04 569 aaKnown RBP9.23□□□□□ -0.93
NUP50-214ENST00000469163 Q6ZSR6 202 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 LMX1AQ8TE12 382 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 TMEM203Q969S6 136 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 FXYD6Q9H0Q3 95 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 SEMA6CQ9H3T2 930 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 CHRNA9Q9UGM1 479 aa9.23□□□□□ -0.93
NUP50-214ENST00000469163 MEIKINA0A087WXM9 373 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 K7EQS6 105 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 OR1F1O43749 312 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 SEMA4FO95754 770 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 IFNA2P01563 188 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 RNH1P13489 461 aaKnown RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 UQCRC2P22695 453 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 AVPR2P30518 371 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 SDC2P34741 201 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 SKP1P63208 163 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 MRPS10P82664 201 aaKnown RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 B4GALNT1Q00973 533 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 ID2Q02363 134 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 ARHGAP19Q14CB8 494 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 ZNF239Q16600 458 aaKnown RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 DUOXA1Q1HG43 343 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 SLC35D3Q5M8T2 416 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 GSG1LQ6UXU4 331 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 ZNF783Q6ZMS7 281 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 RNF113BQ8IZP6 322 aaKnown RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 OR9Q1Q8NGQ5 310 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 LCN9Q8WX39 176 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 OR2M2Q96R28 347 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 PHF7Q9BWX1 381 aaPredicted RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 AKTIPQ9H8T0 292 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 SOHLH2Q9NX45 425 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 LEF1Q9UJU2 399 aaPredicted RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 DYRK1BQ9Y463 629 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 CEP295Q9C0D2 2601 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms