RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 GABRA1P14867 456 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 SHC1P29353 583 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 RRM2P31350 389 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 PTGER4P35408 488 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 SRYQ05066 204 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 CTU2Q2VPK5 515 aaKnown RBP13.68□□□□□ -0.22
SNIP1-202ENST00000468040 FGD3Q5JSP0 725 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 C1orf140Q5VVS0 124 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 OR2T5Q6IEZ7 315 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 WDR88Q6ZMY6 472 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 CHMP1BQ7LBR1 199 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 ATCAYQ86WG3 371 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 GALNT11Q8NCW6 608 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 OR2T29Q8NH02 315 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 OR2V1Q8NHB1 315 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 TMEM255BQ8WV15 326 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 TMEM239Q8WW34 195 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 ACOT11Q8WXI4 607 aaPredicted RBP13.68□□□□□ -0.22
SNIP1-202ENST00000468040 MIB2Q96AX9 1013 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 OR5B2Q96R09 309 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 OR11A1Q9GZK7 315 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 REEP1Q9H902 201 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 TIGARQ9NQ88 270 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 MAN2C1Q9NTJ4 1040 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 ZNF835Q9Y2P0 537 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 MED31Q9Y3C7 131 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 ZNF407Q9C0G0 2248 aa13.68□□□□□ -0.22
SNIP1-202ENST00000468040 TRAV36DV7A0A075B6V5 113 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 A0A0J9YW62 118 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 ZC3H12DA2A288 527 aaKnown RBP13.67□□□□□ -0.22
SNIP1-202ENST00000468040 HTR3EA5X5Y0 456 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 TNFSF11O14788 317 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 HNRNPRO43390 633 aaKnown RBP13.67□□□□□ -0.22
SNIP1-202ENST00000468040 OR2T1O43869 369 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 WDR1O75083 606 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 ENTPD5O75356 428 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 PMS2P2O95744 297 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 CST1P01037 141 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 IDUAP35475 653 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 EIF1AXP47813 144 aaKnown RBP13.67□□□□□ -0.22
SNIP1-202ENST00000468040 SUCLG1P53597 346 aaKnown RBP13.67□□□□□ -0.22
SNIP1-202ENST00000468040 CASP6P55212 293 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 CSNK2A1P68400 391 aaPredicted RBP13.67□□□□□ -0.22
SNIP1-202ENST00000468040 EGR4Q05215 589 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 C19orf57Q0VDD7 668 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 FOXD4Q12950 439 aaPredicted RBP13.67□□□□□ -0.22
SNIP1-202ENST00000468040 MYBPHQ13203 477 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 GK3PQ14409 553 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 C3AR1Q16581 482 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 GXYLT1Q4G148 440 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 HBMQ6B0K9 141 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 ZNF730Q6ZMV8 503 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 Q6ZPB1 254 aaPredicted RBP13.67□□□□□ -0.22
SNIP1-202ENST00000468040 TMPPEQ6ZT21 453 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 RRM2BQ7LG56 351 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 CD163Q86VB7 1156 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 NKAIN4Q8IVV8 208 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 RNF113BQ8IZP6 322 aaKnown RBP13.67□□□□□ -0.22
SNIP1-202ENST00000468040 ZPLD1Q8TCW7 415 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 STMN2Q93045 179 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 ADGRG7Q96K78 797 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 ARL5BQ96KC2 179 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 KLHL4Q9C0H6 718 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 PNPLA3Q9NST1 481 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 TMCC3Q9ULS5 477 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 TRAPPC4Q9Y296 219 aa13.67□□□□□ -0.22
SNIP1-202ENST00000468040 SHANK1Q9Y566 2161 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 DNAJC13O75165 2243 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 H0YC42 278 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 SULT2B1O00204 365 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 GNGT2O14610 69 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 DNPH1O43598 174 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
SNIP1-202ENST00000468040 TIPRLO75663 272 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 IGF2P01344 180 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 HOXD4P09016 255 aaPredicted RBP13.66□□□□□ -0.22
SNIP1-202ENST00000468040 FASP25445 335 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 DIO1P49895 249 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 HMGA2P52926 109 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 TPD52P55327 224 aaPredicted RBP13.66□□□□□ -0.22
SNIP1-202ENST00000468040 CLDN15P56746 228 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 CARD18P57730 90 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 SGCBQ16585 318 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 FAM69AQ5T7M9 428 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 ZNF585AQ6P3V2 769 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 OR5M9Q8NGP3 310 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 OR6S1Q8NH40 331 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 OR52J3Q8NH60 311 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 OR10D3Q8NH80 312 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 SLC7A13Q8TCU3 470 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 PYDC1Q8WXC3 89 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 OSTF1Q92882 214 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 CPNE4Q96A23 557 aaPredicted RBP13.66□□□□□ -0.22
SNIP1-202ENST00000468040 ZHX1-C8orf76Q96EF9 292 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 KTI12Q96EK9 354 aaPredicted RBP13.66□□□□□ -0.22
SNIP1-202ENST00000468040 ALPK1Q96QP1 1244 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 TAPBPLQ9BX59 468 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 TP63Q9H3D4 680 aaPredicted RBP13.66□□□□□ -0.22
SNIP1-202ENST00000468040 COQ10BQ9H8M1 238 aa13.66□□□□□ -0.22
SNIP1-202ENST00000468040 KRCC1Q9NPI7 259 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms