RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SERTM1A2A2V5 107 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 FCMRO60667 390 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 UPK1BO75841 260 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 PAPLNO95428 1278 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 IGHG1P01857 330 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 GLB1P16278 677 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 HTR1FP30939 366 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 GABRA5P31644 462 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 UGT2B10P36537 528 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 PITPNBP48739 271 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 DUSP8Q13202 625 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 IHHQ14623 411 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 SLC22A10Q63ZE4 541 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 RPL22L1Q6P5R6 122 aaKnown RBP12.76□□□□□ -0.37
BRAT1-203ENST00000467558 CA13Q8N1Q1 262 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 FRMD1Q8N878 549 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 WDR34Q96EX3 536 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 SEMA4GQ9NTN9 838 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 SCN10AQ9Y5Y9 1956 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 UPK1AO00322 258 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 CD14P08571 375 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 ACTBP60709 375 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 PSMA6P60900 246 aaKnown RBP12.76□□□□□ -0.37
BRAT1-203ENST00000467558 RAB2AP61019 212 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 ACTG1P63261 375 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 PHC1P78364 1004 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 DPY19L2P2Q6ZN68 376 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 SLC46A3Q7Z3Q1 461 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 NKAIN4Q8IVV8 208 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 SLC35F3Q8IY50 421 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 ASB17Q8WXJ9 295 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 UBE2FQ969M7 185 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 KLHL9Q9P2J3 617 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 HHLA2Q9UM44 414 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 SLC6A14Q9UN76 642 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 LILRA5A6NI73 299 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 HSPA12AO43301 675 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 SEC14L2O76054 403 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 SCG5P05408 212 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 KCNAB1Q14722 419 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 CALHM3Q86XJ0 350 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 ZNF565Q8N9K5 539 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 GOT1L1Q8NHS2 421 aaPredicted RBP12.76□□□□□ -0.37
BRAT1-203ENST00000467558 THAP6Q8TBB0 222 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 NT5CQ8TCD5 201 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 ARHGAP9Q9BRR9 750 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 ALG12Q9BV10 488 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 MED20Q9H944 212 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 A0A0A6YYD5 115 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 FTCDNL1E5RQL4 147 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 CHRM4P08173 479 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 HOXC4P09017 264 aaPredicted RBP12.76□□□□□ -0.37
BRAT1-203ENST00000467558 RUNX2Q13950 521 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 ARL6IP1Q15041 203 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 PLK5Q496M5 336 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 NKAPLQ5M9Q1 402 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 TPRA1Q86W33 373 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 FN3KQ9H479 309 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 NUDT15Q9NV35 164 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 NLKQ9UBE8 527 aa12.76□□□□□ -0.37
BRAT1-203ENST00000467558 MCTS1Q9ULC4 181 aaKnown RBP12.76□□□□□ -0.37
BRAT1-203ENST00000467558 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 ASPDHA6ND91 283 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 EIF4E2O60573 245 aaKnown RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 RAD51DO75771 328 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 OPN1LWP04000 364 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 CD3GP09693 182 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 HERV-K104P61576 105 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 SLC35A2P78381 396 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 ATOH1Q92858 354 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 ZNF587Q96SQ5 575 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 NRSN2Q9GZP1 204 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 PPM1DO15297 605 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 SCGNO76038 276 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 H2AFB2P0C5Z0 115 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 GDF1P27539 372 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 SSR4P51571 173 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 TMEM176BQ3YBM2 270 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 TIGD4Q8IY51 512 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 CCDC54Q8NEL0 328 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 NLGN4YQ8NFZ3 816 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 ZNF160Q9HCG1 818 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 BOKQ9UMX3 212 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 HSPB11Q9Y547 144 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 FXYD6-FXYD2A0A087WZ82 144 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 OR2A25A4D2G3 310 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 IFNA7P01567 189 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 PPICP45877 212 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 AP2S1P53680 142 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 TIAL1Q01085 375 aaKnown RBP eCLIP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 RNASE10Q5GAN6 216 aaKnown RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 VASNQ6EMK4 673 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 B3GLCTQ6Y288 498 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 KMT5CQ86Y97 462 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 ZSCAN4Q8NAM6 433 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 ZNF431Q8TF32 576 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 SLC41A2Q96JW4 573 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 MNTQ99583 582 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 FXYD6Q9H0Q3 95 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms