RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 PDGFRLQ15198 375 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 IRF4Q15306 451 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 MINDY4Q4G0A6 757 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 FAM46CQ5VWP2 391 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 OR4C11Q6IEV9 310 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 KIAA1211LQ6NV74 962 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 STX12Q86Y82 276 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 OR2A1Q8NGT9 310 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 TRMT10AQ8TBZ6 339 aaKnown RBP16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 RGMAQ96B86 450 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 ZFP3Q96NJ6 502 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 FUZQ9BT04 418 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 RPP25Q9BUL9 199 aaKnown RBP16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 GPN1Q9HCN4 374 aaPredicted RBP16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 KCNE3Q9Y6H6 103 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 TRBV23OR9-2A0A075B6M9 112 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 FRS3O43559 492 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 SC5DO75845 299 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 IGHV2-70P01814 119 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 NR2F1P10589 423 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 SPI1P17947 270 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 PTNP21246 168 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 NCBP2P52298 156 aaKnown RBP eCLIP16.7■□□□□ 0.262e-19■□□□□ 8.9
SNAPC3-205ENST00000467062 SNRPNP63162 240 aaKnown RBP16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 CST6Q15828 149 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 FAM74A1Q5RGS3 127 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 PGBD2Q6P3X8 592 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 USP53Q70EK8 1073 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 PUSL1Q8N0Z8 303 aaKnown RBP16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 KLHL36Q8N4N3 616 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 OR11G2Q8NGC1 345 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 OR14A16Q8NHC5 309 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 ZG16BQ96DA0 208 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 C16orf58Q96GQ5 468 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 PAPOLGQ9BWT3 736 aaKnown RBP16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 ZNF69Q9UC07 566 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 FLVCR2Q9UPI3 526 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 MYO10Q9HD67 2058 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 LRIT2A6NDA9 550 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 ERGP11308 486 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 MST1P26927 711 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 BCL6P41182 706 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 GIPRP48546 466 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 LASP1Q14847 261 aaKnown RBP16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 C2orf27AQ580R0 203 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 C18orf63Q68DL7 685 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 KIAA1161Q6NSJ0 714 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 OR6K3Q8NGY3 331 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 KXD1Q9BQD3 176 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 HDAC8Q9BY41 377 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 ATG4BQ9Y4P1 393 aa16.7■□□□□ 0.26
SNAPC3-205ENST00000467062 EFCAB7A8K855 629 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 GPR31O00270 319 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 ERI3O43414 337 aaKnown RBP16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 CREBL2O60519 120 aaPredicted RBP16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 CRYBA1P05813 215 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 SDHBP21912 280 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 GMFBP60983 142 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 REEP5Q00765 189 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 GPM6BQ13491 265 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 RUNX3Q13761 415 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 SFXN4Q6P4A7 337 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 GLDNQ6ZMI3 551 aaPredicted RBP16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 SERPINA12Q8IW75 414 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 ARMC10Q8N2F6 343 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 FAM98AQ8NCA5 519 aaKnown RBP16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 DOK4Q8TEW6 326 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 AMDHD1Q96NU7 426 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 GPA33Q99795 319 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 OR10A4Q9H209 315 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 THAP10Q9P2Z0 257 aaPredicted RBP16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 TTLL8A6PVC2 850 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 SPDEFO95238 335 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 H1F0P07305 194 aaKnown RBP16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 PRF1P14222 555 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 PTGFRP43088 359 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 EFNB1P98172 346 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 MLLT1Q03111 559 aaPredicted RBP16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 PRDX1Q06830 199 aaKnown RBP16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 EOGTQ5NDL2 527 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 SFRP4Q6FHJ7 346 aaPredicted RBP16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 BAIAP2L2Q6UXY1 529 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 CBLN2Q8IUK8 224 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 FGF11Q92914 225 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 CAMK1GQ96NX5 476 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 MNTQ99583 582 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 BTBD1Q9H0C5 482 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 ENKD1Q9H0I2 346 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 A4GALTQ9NPC4 353 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 ZFP57Q9NU63 452 aa16.69■□□□□ 0.26
SNAPC3-205ENST00000467062 FXYD6-FXYD2A0A087WZ82 144 aa16.68■□□□□ 0.26
SNAPC3-205ENST00000467062 SLC31A1O15431 190 aa16.68■□□□□ 0.26
SNAPC3-205ENST00000467062 GSTZ1O43708 216 aaPredicted RBP16.68■□□□□ 0.26
SNAPC3-205ENST00000467062 FCARP24071 287 aa16.68■□□□□ 0.26
SNAPC3-205ENST00000467062 BUD31P41223 144 aaPredicted RBP16.68■□□□□ 0.26
SNAPC3-205ENST00000467062 NDUFA9Q16795 377 aa16.68■□□□□ 0.26
SNAPC3-205ENST00000467062 RTL10Q7L3V2 364 aa16.68■□□□□ 0.26
SNAPC3-205ENST00000467062 SKA3Q8IX90 412 aa16.68■□□□□ 0.26
SNAPC3-205ENST00000467062 SHISA5Q8N114 240 aa16.68■□□□□ 0.26
SNAPC3-205ENST00000467062 RELL2Q8NC24 303 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 299.4 ms