RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 A0A1W2PQ72 361 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 M0R082 166 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 FOXD2O60548 495 aaPredicted RBP19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 NDUFB2O95178 105 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 RAB36O95755 333 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 MT-CO3P00414 261 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 TGFBR2P37173 567 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 GAS1P54826 345 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 EGR4Q05215 589 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 EIF3IQ13347 325 aaKnown RBP19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 CTF1Q16619 201 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 SLC35F1Q5T1Q4 408 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 CXXC5Q7LFL8 322 aaKnown RBP19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 CPOQ8IVL8 374 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 LIPHQ8WWY8 451 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 ERGIC3Q9Y282 383 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 PCDHGA3Q9Y5H0 932 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 AHCTF1Q8WYP5 2266 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 CCDC187A0A096LP49 1063 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 A0A1W2PPW3 197 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 PPP1R3DO95685 299 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 IGHEP01854 428 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 FBXO45P0C2W1 286 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 PEPDP12955 493 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 GP1BBP13224 206 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 LIPAP38571 399 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 RPS4XP62701 263 aaKnown RBP19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 C17orf67Q0P5P2 114 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 ZNF74Q16587 644 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 TIPARPQ7Z3E1 657 aaKnown RBP19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 GALNT15Q8N3T1 639 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 OR11G2Q8NGC1 345 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 GPR119Q8TDV5 335 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 RASL10BQ96S79 203 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 DCUN1D5Q9BTE7 237 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 TAPBPLQ9BX59 468 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 FGF20Q9NP95 211 aaPredicted RBP19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 MMP25Q9NPA2 562 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 OSGIN1Q9UJX0 560 aa19.24■□□□□ 0.67
PPP1R3F-203ENST00000466508 CEP250Q9BV73 2442 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 A0A1W2PNU3 283 aaPredicted RBP19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 FAM183AA6NL82 134 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 C9orf172C9J069 976 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 CD36P16671 472 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 HTR1FP30939 366 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 QPRTQ15274 297 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 MED22Q15528 200 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 COL28A1Q2UY09 1125 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 ARHGAP11AQ6P4F7 1023 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 DHRS13Q6UX07 377 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 GID4Q8IVV7 300 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 SLC15A4Q8N697 577 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 BBS1Q8NFJ9 593 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 M1APQ8TC57 530 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 OR5M11Q96RB7 305 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 MND1Q9BWT6 205 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 SPRY4Q9C004 299 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 H2AFY2Q9P0M6 372 aaPredicted RBP19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 CLEC2DQ9UHP7 191 aa19.23■□□□□ 0.67
PPP1R3F-203ENST00000466508 RIIAD1A6NNX1 92 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 SOCS6O14544 535 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 AHCYL1O43865 530 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 CXCR1P25024 350 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 NFATC3Q12968 1075 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 C3orf38Q5JPI3 329 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 PLBD1Q6P4A8 553 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 TCFL5Q9UL49 500 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 LSM2Q9Y333 95 aaKnown RBP19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 CPAMD8Q8IZJ3 1885 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 DKK1O94907 266 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 CELA2AP08217 269 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 RAB40ALP0C0E4 278 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 ZNF3P17036 446 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 TCN2P20062 427 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 NR4A1P22736 598 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 NOS3P29474 1203 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 SUMO3P55854 103 aaPredicted RBP19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 PRPS1P60891 318 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 NTRK2Q16620 822 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 ZNF362Q5T0B9 420 aaPredicted RBP19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 PROKR2Q8NFJ6 384 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 CT55Q8WUE5 264 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 SPACA9Q96E40 222 aaPredicted RBP19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 GALNT9Q9HCQ5 603 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 NANSQ9NR45 359 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 TAS2R10Q9NYW0 307 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 CHRNA9Q9UGM1 479 aa19.22■□□□□ 0.67
PPP1R3F-203ENST00000466508 NSG1A0A0A6YYJ2 146 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 MCIDASD6RGH6 385 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 MYL12AP19105 171 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 HK1P19367 917 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 POLR2HP52434 150 aaKnown RBP19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 AQP6Q13520 282 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 ARMCX4Q5H9R4 360 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 HES3Q5TGS1 186 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 TMEM164Q5U3C3 297 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 NIPAL3Q6P499 406 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 NDUFAF7Q7L592 441 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 GRINAQ7Z429 371 aa19.21■□□□□ 0.67
PPP1R3F-203ENST00000466508 NANOGP1Q8N7R0 232 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms