RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 CPSF4O95639 269 aaKnown RBP11.3□□□□□ -0.6
SRM-203ENST00000465788 CSF3P09919 207 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 LBPP18428 481 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 S100A3P33764 101 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 TTKP33981 857 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 RPL14P50914 215 aaKnown RBP11.3□□□□□ -0.6
SRM-203ENST00000465788 NUDT6P53370 316 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 ABCE1P61221 599 aaKnown RBP11.3□□□□□ -0.6
SRM-203ENST00000465788 SLC35A1P78382 337 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 PDCD2Q16342 344 aaPredicted RBP11.3□□□□□ -0.6
SRM-203ENST00000465788 GPAT3Q53EU6 434 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 ZNF544Q6NX49 715 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 TNFAIP8L2Q6P589 184 aaPredicted RBP11.3□□□□□ -0.6
SRM-203ENST00000465788 SLC22A25Q6T423 547 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 CLEC2AQ6UVW9 174 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 FRRS1Q6ZNA5 592 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 ZNF440Q8IYI8 595 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 PIAS4Q8N2W9 510 aaPredicted RBP11.3□□□□□ -0.6
SRM-203ENST00000465788 MGARPQ8TDB4 240 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 ZNF524Q96C55 264 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 TRNT1Q96Q11 434 aaKnown RBP11.3□□□□□ -0.6
SRM-203ENST00000465788 MDFIQ99750 246 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 PAIP2Q9BPZ3 127 aaKnown RBP11.3□□□□□ -0.6
SRM-203ENST00000465788 PIF1Q9H611 641 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 FKRPQ9H9S5 495 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 CTPS2Q9NRF8 586 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 BTNL2Q9UIR0 455 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 DCTN4Q9UJW0 460 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 AMDHD2Q9Y303 409 aa11.3□□□□□ -0.6
SRM-203ENST00000465788 FAM234BA2RU67 622 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 WDR91A4D1P6 747 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 C9JVG2 144 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 E9PBE3 544 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 RAMP1O60894 148 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 SCN2BO60939 215 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 RAD51DO75771 328 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 CD8AP01732 235 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 SLC25A16P16260 332 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 CD40P25942 277 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 RYKP34925 604 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 POLR2HP52434 150 aaKnown RBP11.29□□□□□ -0.6
SRM-203ENST00000465788 OR2B6P58173 313 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 CHRNB3Q05901 458 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 RAB35Q15286 201 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 CHI3L2Q15782 390 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 MAPK14Q16539 360 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 ZSWIM7Q19AV6 140 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 ATG16L1Q676U5 607 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 ABHD12BQ7Z5M8 362 aaPredicted RBP11.29□□□□□ -0.6
SRM-203ENST00000465788 HIPK1Q86Z02 1210 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 MUC15Q8N387 334 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 ZNF781Q8N8C0 355 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 DYDC1Q8WWB3 177 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 ZNF775Q96BV0 537 aaPredicted RBP11.29□□□□□ -0.6
SRM-203ENST00000465788 CCDC115Q96NT0 180 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 MUS81Q96NY9 551 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 SLC35A5Q9BS91 424 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 INTS9Q9NV88 658 aaKnown RBP11.29□□□□□ -0.6
SRM-203ENST00000465788 NPAP1Q9NZP6 1156 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 UPB1Q9UBR1 384 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 HAO1Q9UJM8 370 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 ADAM21Q9UKJ8 722 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 SLC25A15Q9Y619 301 aa11.29□□□□□ -0.6
SRM-203ENST00000465788 TMED7-TICAM2A0A0A6YYA0 188 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 CENPVL1A0A0U1RR11 272 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 A8MV72 311 aaPredicted RBP11.28□□□□□ -0.6
SRM-203ENST00000465788 H7C417 338 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 KLF11O14901 512 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 ADAM11O75078 769 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 SLC1A3P43003 542 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 SLC1A6P48664 564 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 IDH2P48735 452 aaKnown RBP11.28□□□□□ -0.6
SRM-203ENST00000465788 H3F3AP84243 136 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 GSTA3Q16772 222 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 OGFOD2Q6N063 350 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 PAQR6Q6TCH4 344 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 KLHL24Q6TFL4 600 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 CASP12Q6UXS9 341 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 LRRC74BQ6ZQY2 392 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 ATG4DQ86TL0 474 aaPredicted RBP11.28□□□□□ -0.6
SRM-203ENST00000465788 ANKRD46Q86W74 232 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 ADGRG3Q86Y34 549 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 OR52N5Q8NH56 324 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 RAB8BQ92930 207 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 ARL5BQ96KC2 179 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 SF3B5Q9BWJ5 86 aaKnown RBP11.28□□□□□ -0.6
SRM-203ENST00000465788 CACNG6Q9BXT2 260 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 AMBRA1Q9C0C7 1298 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 MTHFD2LQ9H903 347 aaPredicted RBP11.28□□□□□ -0.6
SRM-203ENST00000465788 MOV10Q9HCE1 1003 aaKnown RBP11.28□□□□□ -0.6
SRM-203ENST00000465788 YAE1D1Q9NRH1 226 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 CALML5Q9NZT1 146 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 B3GALT5Q9Y2C3 310 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 TMED7Q9Y3B3 224 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 PMF1-BGLAPU3KQ54 211 aa11.28□□□□□ -0.6
SRM-203ENST00000465788 AGAP5A6NIR3 686 aa11.27□□□□□ -0.61
SRM-203ENST00000465788 ELOA3DA6NLF2 546 aaPredicted RBP11.27□□□□□ -0.61
SRM-203ENST00000465788 HMGN4O00479 90 aa11.27□□□□□ -0.61
SRM-203ENST00000465788 ITM2AO43736 263 aa11.27□□□□□ -0.61
SRM-203ENST00000465788 SSX4O60224 188 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms