RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SGTBQ96EQ0 304 aa16.85■□□□□ 0.29
SYNE4-204ENST00000465425 ABHD1Q96SE0 405 aa16.85■□□□□ 0.29
SYNE4-204ENST00000465425 G6PC3Q9BUM1 346 aa16.85■□□□□ 0.29
SYNE4-204ENST00000465425 NDEL1Q9GZM8 345 aa16.85■□□□□ 0.29
SYNE4-204ENST00000465425 SEMA6CQ9H3T2 930 aa16.85■□□□□ 0.29
SYNE4-204ENST00000465425 MRPS33Q9Y291 106 aaKnown RBP16.85■□□□□ 0.29
SYNE4-204ENST00000465425 A0A0A6YYC8 382 aaPredicted RBP16.84■□□□□ 0.29
SYNE4-204ENST00000465425 I3L1I5 382 aaPredicted RBP16.84■□□□□ 0.29
SYNE4-204ENST00000465425 TFPIP10646 304 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 CTSEP14091 401 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 BTG1P62324 171 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 LGALS3BPQ08380 585 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 PON3Q15166 354 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 ZSWIM7Q19AV6 140 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 SNAP47Q5SQN1 464 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 HMGB4Q8WW32 186 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 VSTM2LQ96N03 204 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 GON7Q9BXV9 100 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 TRAV1-2A0A0B4J238 106 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 MCIDASD6RGH6 385 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 PRAMEF26H0Y7S4 382 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 MAGEB4O15481 346 aaPredicted RBP16.84■□□□□ 0.29
SYNE4-204ENST00000465425 FLRT2O43155 660 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 TFP02787 698 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 CTSBP07858 339 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 GUSBP08236 651 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 RNH1P13489 461 aaKnown RBP16.84■□□□□ 0.29
SYNE4-204ENST00000465425 SKP1P63208 163 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 SRSF5Q13243 272 aaKnown RBP16.84■□□□□ 0.29
SYNE4-204ENST00000465425 NNATQ16517 81 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 NTRK2Q16620 822 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 HACD4Q5VWC8 232 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 LINC00114Q6XXX2 140 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 PLCZ1Q86YW0 608 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 SLC35F2Q8IXU6 374 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 SYS1Q8N2H4 156 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 FRMD1Q8N878 549 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 RCBTB1Q8NDN9 531 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 PELI1Q96FA3 418 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.84■□□□□ 0.29
SYNE4-204ENST00000465425 GNG8Q9UK08 70 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 DTX4Q9Y2E6 619 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 ADAM18Q9Y3Q7 739 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 OR10H1Q9Y4A9 318 aa16.84■□□□□ 0.29
SYNE4-204ENST00000465425 ANKRD34BA5PLL1 514 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 NOTOA8MTQ0 251 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 HRKO00198 91 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 DHFRP00374 187 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 CSTAP01040 98 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 SIRPAP78324 504 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 HTR4Q13639 388 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 ZNF267Q14586 743 aaPredicted RBP16.83■□□□□ 0.28
SYNE4-204ENST00000465425 CDK5R1Q15078 307 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 ZNF141Q15928 474 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 PLA1AQ53H76 456 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 TOMM5Q8N4H5 51 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 DNAJC5GQ8N7S2 189 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 DGAT2Q96PD7 388 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 S1PR5Q9H228 398 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 BRD7Q9NPI1 651 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 ACOXLQ9NUZ1 547 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 POMT2Q9UKY4 750 aa16.83■□□□□ 0.28
SYNE4-204ENST00000465425 TRBV2A0A0J9YWF9 115 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 PRAMEF2O60811 474 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 GABRG2P18507 467 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 SRP9P49458 86 aaKnown RBP16.82■□□□□ 0.28
SYNE4-204ENST00000465425 PSMD4P55036 377 aaKnown RBP16.82■□□□□ 0.28
SYNE4-204ENST00000465425 PITPNAQ00169 270 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 BCL2L15Q5TBC7 163 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 GHDCQ8N2G8 530 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 LRRC17Q8N6Y2 441 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 C19orf47Q8N9M1 422 aaKnown RBP16.82■□□□□ 0.28
SYNE4-204ENST00000465425 SPACA7Q96KW9 195 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 CLEC1BQ9P126 229 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 ABRACLQ9P1F3 81 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 MRPS7Q9Y2R9 242 aaKnown RBP16.82■□□□□ 0.28
SYNE4-204ENST00000465425 SPTBN5Q9NRC6 3674 aaKnown RBP16.82■□□□□ 0.28
SYNE4-204ENST00000465425 LRRN3E7EW58 273 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 OGG1O15527 345 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 EVI2BP34910 448 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 PGDP52209 483 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 TNK1Q13470 666 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 C1orf61Q13536 156 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 GGTLC2Q14390 218 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 NPSR1Q6W5P4 371 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 MCATQ8IVS2 390 aaKnown RBP16.82■□□□□ 0.28
SYNE4-204ENST00000465425 AVL9Q8NBF6 648 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 OR5H6Q8NGV6 325 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 MRPL48Q96GC5 212 aaKnown RBP16.82■□□□□ 0.28
SYNE4-204ENST00000465425 GTPBP2Q9BX10 602 aaKnown RBP16.82■□□□□ 0.28
SYNE4-204ENST00000465425 DPAGT1Q9H3H5 408 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 LRRN3Q9H3W5 708 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 NUDT15Q9NV35 164 aa16.82■□□□□ 0.28
SYNE4-204ENST00000465425 EFCAB7A8K855 629 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 CLDN4O14493 209 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 PPM1BO75688 479 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 UBL3O95164 117 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 EPXP11678 715 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 SNRPBP14678 240 aaKnown RBP16.81■□□□□ 0.28
SYNE4-204ENST00000465425 EDNRAP25101 427 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 424.5 ms